Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02917 ATGTGTCTCCCAGAGGGAGAGGGAGACAACCAGACGTCGATGGCGCTGGAAGCCGTTGTTTTCCCTCAGGAGCACTCCTTCGGCTATGGCGCTTCCAAAGACCTCTATCCTCTCTGGCCCTTTCACGACGATTTCAACCTTCCCAGACATCAGGACCACCTCAATTTCCTCCACAGCCAAACAGAACCTTATGGCTTCGGAGACTGGTGCTCCTCTGTGTTGCCCCAATCCAGCGAACTTGTGCATGTACAGAATCATCACGCCGCCTCTGACACCAGTAACAACCCAACACCCTCGTCTGAAGCCTCCCACTCTCGTCCCAAGAGACGCAGGGCCAGGACCCGCAAGAATACCCAGGAGATCGAGAACCAGAGAATGACTCACATTGCCGTGGAGCGCAATCGAAGAAAGCAGATGAACGACTATCTCTCTGTTCTTCGCTCTCTCATGCCCGACTCCTATGTCCAAAGGGGAGATCAGGCTTCCATAATTGGAGGGGCTATTAACTTTGTGAAGGAGCTGGAGCAGAGGATTCAGTTTCTGGGCGGGCAGAAAGTAACAGGGGCCGAATCTCAGAGCATGCCCTTCTCCGAGTTCTTCATGTTTCCTCAGTATTCGACGAGCTCCAGTGGCGAGAGTTCGGCGGCGAAAGTGGGGGAGGTCTCGTCGGAGGCGAGTATAGCAGATATAGAAGTGACGGTGGTGGAGAGCCACGCGAATCTGAAAATAAGGACAAGGAAGAGGGCGAAGCAGCTGTTGAAGATGGTGTCTGCGTTGTACAGCATGCGTCTCACGATCTTGCATCTCAATGTGACGACCACCGCCGATATTGTGCTCTACTGCATCAGTGTCAAGTTAGAAGAAGAGTGCAGGCTGGGATCAGTGGAGGAGATAGCCGGGGCAGTGCACAATACGTTGGAGATGATCGAACAAGAAAGTGCGCAGAATGAAGATCCCAACACCAACACCAGCTAG 975 0.5323 MCLPEGEGDNQTSMALEAVVFPQEHSFGYGASKDLYPLWPFHDDFNLPRHQDHLNFLHSQTEPYGFGDWCSSVLPQSSELVHVQNHHAASDTSNNPTPSSEASHSRPKRRRARTRKNTQEIENQRMTHIAVERNRRKQMNDYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRIQFLGGQKVTGAESQSMPFSEFFMFPQYSTSSSGESSAAKVGEVSSEASIADIEVTVVESHANLKIRTRKRAKQLLKMVSALYSMRLTILHLNVTTTADIVLYCISVKLEEECRLGSVEEIAGAVHNTLEMIEQESAQNEDPNTNTS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02917 324 Gene3D - 107 186 IPR036638 GO:0046983
Accr5g02917 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 174 IPR011598 GO:0046983
Accr5g02917 324 MobiDBLite consensus disorder prediction 84 102 - -
Accr5g02917 324 PANTHER MAX DIMERIZATION, MAD 74 313 - -
Accr5g02917 324 SMART finulus 129 180 IPR011598 GO:0046983
Accr5g02917 324 MobiDBLite consensus disorder prediction 84 125 - -
Accr5g02917 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 123 187 IPR036638 GO:0046983
Accr5g02917 324 Pfam Helix-loop-helix DNA-binding domain 124 175 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02917 Accr-Chr5 54581882 54583056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02917 14 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 48.684 4.37e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr5g02917 HLH 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02917 - - pvu:PHAVU_007G181900g 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02917 5 54581882 54583056 Accr5g02917 5 54581882 54583056 CCT
Accr5g02917 5 54581882 54583056 Accr5g02917 5 54581882 54583056 ECH