Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02916 ATGCCTCCCCTCCTCTTCCTCCTCCTCCTCCTACTTCCTCCTCCATTCCCTCTGGTCTGCGCCCAGGTCGGCAACACCGGTCCCAACGGCTCTTACTACAACTCCTACAGCCCCTCCCTTGCCATCATCATCGTCATTTTAGTCGTCGCCCTCTTCCTCGTCGGCCTCTTCTCCATCTATATCCGCCAATGCGGCCAATCCTCCAGCAACTCCGTCCCCAACCACACCGCTCGCTCCAGACGTCAGCCTCGGGGTCTTGATGCCGCCGTCATCAACTCTTTCCCCACTCTTGACTACTCCGCCGTTAAGATTCACAAGATTGGAAAAGGTTCCCTGGAATGCGCCGTCTGCTTGAACGAGTTCGACGAGTCCGAAACACTCCGCCTCATCCCCAAGTGCGACCACGTCTTCCATCCCGGCTGCATTGACGAGTGGTTGGCCTCCCACACCACCTGCCCCGTTTGCAGAGCCGACCTCACCCCTCAGCCGGCCGACTCCGTTCATCCACTTCCTGTGCCTGACTCTCACGCTGATATCGAATCCCAAAATGACGCTCCGGAACGTGAGGCCGCCCAGCCCGACGTCACGGGTTTCAATCAGAATCTGAACCGTCACCGTAGTCAGACGGTATGGTGGGCGAGGTCTCACTCCACTGGGCACTCGCTGCCCCAGCCGGGGGAAAACACCGACAGGTACACTCTCAGGCTGCCGGCTGACGTCAGGAATCGGCTGCTAAATCAGAAATTTCATAGGGCCACAAGCTTGGTAGTATTGCCCAGGGAGACTAGTTCGAGGAGGGGGTATCGAACCGGAGGTGAGGGTAGTGGAGGCGGAAGGTTTTCGAAGCGACTGAGCCGCGGCTTTAAATCAGACCGATGGGTCTTCACGATGGCGCCGCCCTTCCTGGTGAGAGCGTCGTCGCTCAGGTCTCCGAAGGTTGCAAGTAACAGTGCCGCGGTTGAAGAGACCTACTCCGACCCCATCATGCCACCATCGGCGGGGGGCTCGTCCCGGCCTCCGGTTTAG 1026 0.5926 MPPLLFLLLLLLPPPFPLVCAQVGNTGPNGSYYNSYSPSLAIIIVILVVALFLVGLFSIYIRQCGQSSSNSVPNHTARSRRQPRGLDAAVINSFPTLDYSAVKIHKIGKGSLECAVCLNEFDESETLRLIPKCDHVFHPGCIDEWLASHTTCPVCRADLTPQPADSVHPLPVPDSHADIESQNDAPEREAAQPDVTGFNQNLNRHRSQTVWWARSHSTGHSLPQPGENTDRYTLRLPADVRNRLLNQKFHRATSLVVLPRETSSRRGYRTGGEGSGGGRFSKRLSRGFKSDRWVFTMAPPFLVRASSLRSPKVASNSAAVEETYSDPIMPPSAGGSSRPPV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02916 341 MobiDBLite consensus disorder prediction 308 341 - -
Accr5g02916 341 Pfam Ring finger domain 113 156 IPR001841 -
Accr5g02916 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 162 IPR013083 -
Accr5g02916 341 SMART ring_2 114 155 IPR001841 -
Accr5g02916 341 SUPERFAMILY RING/U-box 108 162 - -
Accr5g02916 341 CDD RING-H2_EL5-like 113 156 - -
Accr5g02916 341 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Accr5g02916 341 PANTHER RING FINGER DOMAIN-CONTAINING 34 164 - -
Accr5g02916 341 MobiDBLite consensus disorder prediction 165 200 - -
Accr5g02916 341 FunFam E3 ubiquitin-protein ligase ATL6 74 162 - -
Accr5g02916 341 MobiDBLite consensus disorder prediction 263 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02916 Accr-Chr5 54557039 54558064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02916 3 305 Rapid Response to Elicitors AT3G05200 45.062 9.30e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02916 K10664 - gmx:100810865 358.992