Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02910 ATGGACCATCAAGGGCATAACCAGAACCAATCCATGGATCATCATCAACTGCCTTATGCTTCAAATCCATACCAGGCGACCCAAATAACTGCAACGCCTGGATCGGCTGTGACATCAGTTGGGAACATTCAGTACAGTGGTCAGCCCGGCGGAGCTCCGCTTGGACAACATCAACTTGCTTATCAGCACATTCACCAGCAACAGCAGCAGCAACTTCAGCAACAGCTCCAAACCTTTTGGGCTAATCAGTACCAAGAAATCGAGAAGGTGACTGATTTCAAAAATCACAGCCTTCCCTTGGCGAGGATCAAGAAGATTATGAAAGCTGATGAAGATGTTAGAATGATATCAGCCGAGGCACCAGTCATATTTGCAAGGGCATGTGAGATGTTTATACTAGAGCTAACTCTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGAGAACACTTCAGAAGAACGATATTGCAGCAGCAATCACAAGGACTGATATATTTGATTTCTTGGTTGATATTGTCCCGCGTGAGGATTTGAAAGATGAAGTGCTTGCATCTATCCCAAGAGGGACAATGCCTGTGGCAGGGCCTGCTGATGCTCTTCCTTACTGTTACATGCCACCTCAGCATGCATCGCAAGCAGGCGCATCTGGCGTCATAATGGGTAAGCCTGTGATGGACCCGACCATGTATGCCCAACAGTCTCATCCCTACTTACCACAGCAGATGTGGCCACAGCCTCCAGACCAGCAACGACAACCAACTCCTGATCGTTAG 774 0.4767 MDHQGHNQNQSMDHHQLPYASNPYQATQITATPGSAVTSVGNIQYSGQPGGAPLGQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHASQAGASGVIMGKPVMDPTMYAQQSHPYLPQQMWPQPPDQQRQPTPDR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02910 257 MobiDBLite consensus disorder prediction 235 257 - -
Accr5g02910 257 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 60 198 - -
Accr5g02910 257 SUPERFAMILY Histone-fold 66 169 IPR009072 GO:0046982
Accr5g02910 257 Pfam Core histone H2A/H2B/H3/H4 63 160 IPR007125 GO:0003677
Accr5g02910 257 Gene3D Histone, subunit A 59 175 IPR009072 GO:0046982
Accr5g02910 257 FunFam Nuclear transcription factor Y subunit gamma 62 175 - -
Accr5g02910 257 MobiDBLite consensus disorder prediction 240 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02910 Accr-Chr5 54521572 54522345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02910 1 243 CCAAT-HAP5 Transcription Factor Family AT1G08970 61.475 2.15e-87 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr5g02910 CBFD_NFYB_HMF 5.6e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02910 K08066 - gmx:100527803 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02910 5 54521572 54522345 Accr5g02910 5 54521572 54522345 CCT
Accr5g02910 5 54521572 54522345 Accr5g02910 5 54521572 54522345 ECH