Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02896 ATGAGTGTTGATCTGGAATCGTTGGCGGAGGCGACCTCTGGTGCCATAGGATCACTCTTGAGCACGACCATCTTGTACCCGCTTGACACCTGCAAGACCAAGTACCAAGCCGAGGCTCGGGCTCATGGCCACCAAAAATACAGGAACCTCTCTGATGTGTTATGGGAAGCAATATCTTCCCGTCAGGTGCTTTCCCTTTATCAGGGTCTGGGAACGAAAAACCTTCAATCCTTCATTTCACAGTTTGTCTACTTCTATGGCTACAGCTACTTCAAAAGAATGTATCTGCGGAAGAGCGGTTCTAAACGTATTGGAACCAAAGAAAACTTGGTCATTGCTGCTGCTGCTGGGGCGTGCACTGCCATTGTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACGAGTGATTTTGGAAAATCTAAAGGTCTTTTGAAGACCCTTACAGAAGGCACTTGGAGTGAGGCATTTGATGGTCTTGGCATTTCCTTACTGCTGACCTCAAACCCTGCAATTCAGTATACAGTTTTTGATCAGCTGAAACAACGAGCCCTGAAGAATCAACGAAACAGTGTAGACAGAGGATCGTCTCCAGTATCCCTTTCTGCATTTATGGCCTTTTTCCTGGGAGCTATTTCAAAGAGTGTTGCTACCGTCTTAACGTATCCAGCTATCAGGTGCAAGGTGATGATTCAAGCTGCAGACAATGAGGAAAAACCAACCTCAAAATCACAGAAAAAGTCAAGGAAAACAATCTGTGGAGTTTTCTGTGCTATATGGCAACGGGAGGGCTTACTGGGTTACTTCAAAGGATTGCATGCTCAAATCTTAAAGACTGTTTTGAGCTCAGCATTGCTTTTGATGATAAAGGAGAAGATCTCTGCCACTACTTGGGTACTTATACTTGCAATTAGAAGGTTACTGTTGCTCCCAAGGGGTAGAGTAAAAAACCAATAA 960 0.451 MSVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARAHGHQKYRNLSDVLWEAISSRQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRMYLRKSGSKRIGTKENLVIAAAAGACTAIVTQPLDTASSRMQTSDFGKSKGLLKTLTEGTWSEAFDGLGISLLLTSNPAIQYTVFDQLKQRALKNQRNSVDRGSSPVSLSAFMAFFLGAISKSVATVLTYPAIRCKVMIQAADNEEKPTSKSQKKSRKTICGVFCAIWQREGLLGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAIRRLLLLPRGRVKNQ 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02896 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Accr5g02896 319 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 318 IPR045900 GO:0005347|GO:0006635|GO:0015217
Accr5g02896 319 Gene3D Mitochondrial carrier domain 4 298 IPR023395 -
Accr5g02896 319 SUPERFAMILY Mitochondrial carrier 7 293 IPR023395 -
Accr5g02896 319 FunFam Peroxisomal adenine nucleotide carrier 1 3 298 - -
Accr5g02896 319 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Accr5g02896 319 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Accr5g02896 319 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Accr5g02896 319 Pfam Mitochondrial carrier protein 202 295 IPR018108 -
Accr5g02896 319 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Accr5g02896 319 Pfam Mitochondrial carrier protein 105 188 IPR018108 -
Accr5g02896 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Accr5g02896 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 297 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02896 Accr-Chr5 54460651 54463040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02896 23 312 Chloroplast and Mitochondria Gene Families AT1G25380 26.645 5.48e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02896 5 54460651 54463040 Accr5g02896 5 54460651 54463040 CCT
Accr5g02896 5 54460651 54463040 Accr5g02896 5 54460651 54463040 ECH