Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02890 ATGGAAATCCTTACTGAGAAGTTTAATCAATTTGTGATTGACTGCAATTTGAAGTCATCTAATCGCGTTTCAGGCAATATTGCACCACAAGTGAAAGAGCATTCTGTCTGCATGGATGAAAATAGTCTGTCCAATGGGACGAATGAAATTTCTCCAGATAAGGGTCATACACTTCCAATATTGAAGAAAATACTTGATTTGAGTTCGAAAATTCAGGAGTTGAAGAACCAACATGTAGCCCTATCTGATCATGTGAAACTCACAACTGATTCCTTTCCAGGCCTTGTAGTAAATTCTGTTCAGAGTCTAGGCACTGAGTACGAACTACTGAAAAGAAAGTACCTTGAGGAGTTCGCAGAGCGGAGACGGCTTTACAATGAAGTGATTGAAATGAAGGGAAACATCCGAGTTTTCTGCAGATGCAGACCTCTAAATGAAAATGAAACTGCTAATGGACATGCATCTGTCATCAACTTTGAATCGTCTTCCGACAATGAGCTTCAAGTCATTTGCTCTGATTCTTCTAAAAAGCAATTTAGATTTGACTGTGTGTTTCGACCTGATGATAATCAAGAGGCTGTTTTTGCACAAACAAAACCTATTATTACATCAGTGTTGGATGGGTTTAACGTTTGCATTTTTGCCTACGGCCAAACTGGAACTGGTAAGACCTTTACCATGGAAGGAACACCAGAACATAGGGGAGTTAACTACAGAACACTGGACGAATTATTTCGTATATCTGAAGAGAGACGTAGCGTAATGAAATATAAATTGGTTGTTAGTATGCTGGAAGTTTACAATGAGAAGATAAGGGACCTCTTGGCGGAAAATTCTGACCAACCTACCAAGAAGTTGGAGATTAAGCAAGCAGCAGATGGAACCCAAGAAGTTCCAGGACTAGTTGAAGCTAGTGTTTATGGAATAGAGGACGTGTGGGAAATGCTCAAGTCTGGAAACAGCACCAGATCCGTTGGCTCAACCAATGCTAATGAGCTTAGCAGTCGTTCTCATTGCTTGTTACGAGTTACTGTTATGGGGGAGAATCTTATCAATGGCCAGAGAACAAGAAGTCACCTCTGGCTGGTAGACTTAGCAGGGAGCGAACGTGTGGCTAAAACTGAAGCTGAAGGAGATAGATTGAAGGAATCTCAATTTATAAATAAGTCTCTATCAGCACTCGGTGATGTTGTTTCTGCACTCGCATCCAAATCAGCTCACATCCCTTACAGGAACTCAAAACTCACACATATACTGCAGAGCTCACTAGGAGGGGATTGTAAAACTCTGATGTTTGTCCAGATAAGTCCAAGTGCGGCAGACCTAGGAGAGACACTTTGCTCACTGAATTTTGCCACCCGTGTTCGAGGAATTGAAAGTGGCCCAGCTCGCAAGCAAGTGGACCTTACTGAGCTGTTTAAGTACAAGCAGATGGCAGAAAAGCTTAAGCACGATGAGAAGGAATCAAAGAAATTACAGGATAGCTTGCATGCCTTGCAACTAAGGCTTGCTGCCAGAGAACATATGTGCAGGAATCTTCAGGAAAAGGTTCGGGACCTTGAGAACCAGATAGCAGAGGAGAGAAAAACCAGATTGAAGCAAGAAAGCAGAGCGATTGCAATTTCAGCTCAACCCTCAAGACTCGCAACGCTGAAAGAAGCACCAACTCGGAAACCTCTAGCAGAGAAAAAGCCGCCACTGAATCCTTCGAAGTTGAGGATACCACTGCGGAGGATTACGACAAACATCTTGCCCCAACCATCTCCTATGCCCCCAAAGAAAAATGGAAAGGAAAACACTGCCAGAAAGAGCATAATGATGAGAAACGCAGAAGACCTTGTGAAGCCGAGAAGGGCGTCCATTGCTATGAGACCACAGGCGGCGGCACCTTCAACAAGTCAAGTTTTTCAGCCCAGGAGGCGGGTCTCAATCGCTACATTCCGCCCTGATGCTAGTTCTGACTTGACAACTCCACTTCGTGGCTCTGCCTGTGGATTCACCAGTGGTCAGCACTCATCGATAAGAAGCCAGAGGAAAGCTCGGTATTCAAGGCTGTTTGCTCCATTGCCAGAAATGAGAGCATCAGTTGAGACAACACCAAGTATCATGAGGAGCAGTAGCAAGTTCATGGGCAGTCCCATAGGGGCGGTTAGAAATCCCGCTGTGGTTGCTCTGCAACGAAAATCTTTTGTGTGGAGTCCTCTGAAGCTGAGAAGCTTGAGAAATAGCAGAAAGTCATCACTGTTGCCATCTCGGCCTTCCTCTGAAATGCAATGA 2277 0.4422 MEILTEKFNQFVIDCNLKSSNRVSGNIAPQVKEHSVCMDENSLSNGTNEISPDKGHTLPILKKILDLSSKIQELKNQHVALSDHVKLTTDSFPGLVVNSVQSLGTEYELLKRKYLEEFAERRRLYNEVIEMKGNIRVFCRCRPLNENETANGHASVINFESSSDNELQVICSDSSKKQFRFDCVFRPDDNQEAVFAQTKPIITSVLDGFNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLDELFRISEERRSVMKYKLVVSMLEVYNEKIRDLLAENSDQPTKKLEIKQAADGTQEVPGLVEASVYGIEDVWEMLKSGNSTRSVGSTNANELSSRSHCLLRVTVMGENLINGQRTRSHLWLVDLAGSERVAKTEAEGDRLKESQFINKSLSALGDVVSALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSAADLGETLCSLNFATRVRGIESGPARKQVDLTELFKYKQMAEKLKHDEKESKKLQDSLHALQLRLAAREHMCRNLQEKVRDLENQIAEERKTRLKQESRAIAISAQPSRLATLKEAPTRKPLAEKKPPLNPSKLRIPLRRITTNILPQPSPMPPKKNGKENTARKSIMMRNAEDLVKPRRASIAMRPQAAAPSTSQVFQPRRRVSIATFRPDASSDLTTPLRGSACGFTSGQHSSIRSQRKARYSRLFAPLPEMRASVETTPSIMRSSSKFMGSPIGAVRNPAVVALQRKSFVWSPLKLRSLRNSRKSSLLPSRPSSEMQ 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02890 758 Gene3D Kinesin motor domain 129 501 IPR036961 -
Accr5g02890 758 PRINTS Kinesin heavy chain signature 208 229 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02890 758 PRINTS Kinesin heavy chain signature 359 377 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02890 758 PRINTS Kinesin heavy chain signature 408 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02890 758 PRINTS Kinesin heavy chain signature 328 345 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02890 758 ProSitePatterns Kinesin motor domain signature. 358 369 IPR019821 GO:0003777|GO:0005524|GO:0007018
Accr5g02890 758 ProSiteProfiles Kinesin motor domain profile. 134 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02890 758 Coils Coil 475 537 - -
Accr5g02890 758 Pfam Kinesin motor domain 140 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02890 758 PANTHER KINESIN-LIKE PROTEIN KLP-3 64 592 IPR027640 GO:0003777|GO:0007018
Accr5g02890 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 492 IPR027417 -
Accr5g02890 758 SMART kinesin_4 132 466 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02890 758 CDD KISc_C_terminal 132 459 - -
Accr5g02890 758 FunFam Kinesin-like protein 129 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02890 Accr-Chr5 54415780 54419681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02890 106 483 Calmodulin-binding Proteins AT5G65930 42.063 8.67e-80 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02890 K10406 - gmx:100788477 1060.83