Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02889 ATGGACGAATTAACTATGGAAATCCTTACTGAGAAGTTTAATCAATTTGTGATTGACTGCAATTTGAAGTCATCTAATCGCGTTTCAGGCAATATTGCACCACAAGTGAAAGAGCATTCTGTCTGCATGGATGAAAATAGTCTGTCCAATGGGACGAATGAAATTTCTCCAGATAAGGGTCATACACTTCCAATATTGAAGAAAATACTTGATTTGAGTTCGAAAATTCAGGAGTTGAAGAACCAACATGTAGCCCTATCTGATCATGTGAAACTCACAACTGATTCCTTTCCAGGCCTTGTAGTAAATTCTGTTCAGAGTCTAGGCACTGAGTACGAACTACTGAAAAGAAAGTACCTTGAGGAGTTCGCAGAGCGGAGACGGCTTTACAATGAAGTGATTGAAATGAAGGGAAACATCCGAGTTTTCTGCAGATGCAGACCTCTAAATGAAAATGAAACTGCTAATGGACATGCATCTGTCATCAACTTTGAATCGTCTTCCGACAATGAGCTTCAAGTCATTTGCTCTGATTCTTCTAAAAAGCAATTTAGATTTGACTGTGTGTTTCGACCTGATGATAATCAAGAGGCTGTTTTTGCACAAACAAAACCTATTATTACATCAGTGTTGGATGGGTTTAACGTTTGCATTTTTGCCTACGGCCAAACTGGAACTGGTAAGACCTTTACCATGGAAGGAACACCAGAACATAGGGGAGTTAACTACAGAACACTGGACGAATTATTTCGTATATCTGAAGAGAGACGTAGCGTAATGAAATATAAATTGGTTGTTAGTATGCTGGAAGTTTACAATGAGAAGATAAGGGACCTCTTGGCGGAAAATTCTGACCAACCTACCAAGAAGTTGGAGATTAAGCAAGCAGCAGATGGAACCCAAGAAGTTCCAGGACTAGTTGAAGCTAGTGTTTATGGAATAGAGGACGTGTGGGAAATGCTCAAGTCTGGAAACAGCACCAGATCCGTTGGCTCAACCAATGCTAATGAGCTTAGCAGTCGTTCTCATTGCTTGTTACGAGTTACTGTTATGGGGGAGAATCTTATCAATGGCCAGAGAACAAGAAGTCACCTCTGGCTGGTAGACTTAGCAGGGAGCGAACGTGTGGCTAAAACTGAAGCTGAAGGAGATAGATTGAAGGAATCTCAATTTATAAATAAGTCTCTATCAGCACTCGGTGATGTTGTTTCTGCACTCGCATCCAAATCAGCTCACATCCCTTACAGGAACTCAAAACTCACACATATACTGCAGAGCTCACTAGGAGGGGATTGTAAAACTCTGATGTTTGTCCAGATAAGTCCAAGTGCGGCAGACCTAGGAGAGACACTTTGCTCACTGAATTTTGCCACCCGTGTTCGAGGAATTGAAAGTGGCCCAGCTCGCAAGCAAGTGGACCTTACTGAGCTGTTTAAGTACAAGCAGATGGCAGAAAAGCTTAAGCACGATGAGAAGGAATCAAAGAAATTACAGGATAGCTTGCATGCCTTGCAACTAAGGCTTGCTGCCAGAGAACATATGTGCAGGAATCTTCAGGAAAAGGTTCGGGACCTTGAGAACCAGATAGCAGAGGAGAGAAAAACCAGATTGAAGCAAGAAAGCAGAGCGATTGCAATTTCAGCTCAACCCTCAAGACTCGCAACGCTGAAAGAAGCACCAACTCGGAAACCTCTAGCAGAGAAAAAGCCGCCACTGAATCCTTCGAAGTTGAGGATACCACTGCGGAGGATTACGACAAACATCTTGCCCCAACCATCTCCTATGCCCCCAAAGAAAAATGGAAAGGAAAACACTGCCAGAAAGAGCATAATGATGAGAAACGCAGAAGACCTTGTGAAGCCGAGAAGGGCGTCCATTGCTATGAGACCACAGGCGGCGGCACCTTCAACAAGTCAAGTTTTTCAGCCCAGGAGGCGGGTCTCAATCGCTACATTCCGCCCTGATGCTAGTTCTGACTTGACAACTCCACTTCGTGGCTCTGCCTGTGGATTCACCAGTGGTCAGCACTCATCGATAAGAAGCCAGAGGAAAGCTCGGTATTCAAGGCTGTTTGCTCCATTGCCAGAAATGAGAGCATCAGTTGAGACAACACCAAGTATCATGAGGAGCAGTAGCAAGTTCATGGGCAGTCCCATAGGGGCGGTTAGAAATCCCGCTGTGGTTGCTCTGCAACGAAAATCTTTTGTGTGGAGTCCTCTGAAGCTGAGAAGCTTGAGAAATAGCAGAAAGTCATCACTGTTGCCATCTCGGCCTTCCTCTGAAATGCAATGA 2292 0.4415 MDELTMEILTEKFNQFVIDCNLKSSNRVSGNIAPQVKEHSVCMDENSLSNGTNEISPDKGHTLPILKKILDLSSKIQELKNQHVALSDHVKLTTDSFPGLVVNSVQSLGTEYELLKRKYLEEFAERRRLYNEVIEMKGNIRVFCRCRPLNENETANGHASVINFESSSDNELQVICSDSSKKQFRFDCVFRPDDNQEAVFAQTKPIITSVLDGFNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLDELFRISEERRSVMKYKLVVSMLEVYNEKIRDLLAENSDQPTKKLEIKQAADGTQEVPGLVEASVYGIEDVWEMLKSGNSTRSVGSTNANELSSRSHCLLRVTVMGENLINGQRTRSHLWLVDLAGSERVAKTEAEGDRLKESQFINKSLSALGDVVSALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSAADLGETLCSLNFATRVRGIESGPARKQVDLTELFKYKQMAEKLKHDEKESKKLQDSLHALQLRLAAREHMCRNLQEKVRDLENQIAEERKTRLKQESRAIAISAQPSRLATLKEAPTRKPLAEKKPPLNPSKLRIPLRRITTNILPQPSPMPPKKNGKENTARKSIMMRNAEDLVKPRRASIAMRPQAAAPSTSQVFQPRRRVSIATFRPDASSDLTTPLRGSACGFTSGQHSSIRSQRKARYSRLFAPLPEMRASVETTPSIMRSSSKFMGSPIGAVRNPAVVALQRKSFVWSPLKLRSLRNSRKSSLLPSRPSSEMQ 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02889 763 ProSitePatterns Kinesin motor domain signature. 363 374 IPR019821 GO:0003777|GO:0005524|GO:0007018
Accr5g02889 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 497 IPR027417 -
Accr5g02889 763 Gene3D Kinesin motor domain 134 506 IPR036961 -
Accr5g02889 763 PRINTS Kinesin heavy chain signature 364 382 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02889 763 PRINTS Kinesin heavy chain signature 213 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02889 763 PRINTS Kinesin heavy chain signature 413 434 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02889 763 PRINTS Kinesin heavy chain signature 333 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02889 763 CDD KISc_C_terminal 137 464 - -
Accr5g02889 763 Pfam Kinesin motor domain 145 463 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02889 763 Coils Coil 480 542 - -
Accr5g02889 763 FunFam Kinesin-like protein 134 503 - -
Accr5g02889 763 ProSiteProfiles Kinesin motor domain profile. 139 463 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g02889 763 PANTHER KINESIN-LIKE PROTEIN KLP-3 69 597 IPR027640 GO:0003777|GO:0007018
Accr5g02889 763 SMART kinesin_4 137 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02889 Accr-Chr5 54415780 54419821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02889 109 488 Calmodulin-binding Proteins AT5G65930 41.579 8.09e-80 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02889 K10406 - gmx:100788477 1061.21