Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02887 ATGCAAGACATTTTTGGATCAGTTCGCCGATCACTGGTGTTTCGTGCTACGCCGGAGAACGAAGAAGCCTCACTAGGAGGAACCCTAGTTGATAAGATCAATTCTTGCATTCGCAAGTCCAGAGTCTTCTCTAAACCTTCTCCCGCGTCTCCGCCAATGCCACCCGTCACAAAGGAATCTTCACCGATGATCCGATGGCGCAAAGGCGAGTTGATCGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCAGTTAAACAGGTTCTGATCGCGGCTAGCAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCTCATCCCAATATTGTTAGATATTTGGGCACAGTTAGGGAGGAGGACACCTTAAATATTCTTCTGGAGTTTGTACCAGGTGGATCCATATCATCACTTTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTTATTAGAACTTTCACGCAGCAGTTACTGCTGGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTTGATAATAAAGGGTGCATAAAACTTGCAGATTTTGGGGCGTCCAAACAGGTCGTTGAGCTGGCTACCATTTCCGGTGCCAAGTCTATGAAGGGCACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGCCATAGCTTCTCGGCTGATATATGGAGCGTTGGCTGTACTGTGATTGAAATGGCCACTGGAAAACCTCCCTGGAGCCAGCAGTACCAAGAGGTTGCCGCTCTCTTCCACATAGGAACAACAAAGTCTCATCCACCAATTCCGGACCATCTCTCTATTGGAGCAAAAGATTTTCTATCAAAATGTTTGCAGAAGGAACCAGGGTTAAGGCCATCAGCATCAGAACTGCTCCAGCATCCTTTTGTTACTGGTGAACAATTGGGTTCATTTCCTGGGTCATATACCGCAATGGGAAAATTTGAAGCTTCTTCAACGTCTTGGTCCTCAAACATCGAAACTACCTCAACTGTACATCCTGAGGAAGAAAATAAAGACTATTGGGGAATGGGCAATGATGACGACATGTGTGAGATTGATGACAAAGATGAGTTATCTGAGGGGGCTGTTAAATTTAGATCCTCGATATCAGAAAATATAATGAGTTTCAACCCAATGTCTGATCCCTCTGATGATTGGAGTTGCAAATTTGTTGGGAGTCCAGAACGGGATCGTAGTGGAGTTAGTATTACCACTGACGAAATGTTCAAGCCTTCTGATCACCTGGAGGCTTCCCATGAGGAACACAGAGATTTTTCCCTTTCAGGTGAACCATCAGTGTCTGAGGATGATGATGAGCTCACGGAGTCAAAAATACAAGCCTTTTTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTCTACAACAGTTTAAATACTTCTTGTTCTCCCAGTGCGGTTGAGAAAACGAATGATGAAACTACTTCAAAGTTCTTGAAATTACCTCCGAAAAGCAGGTCCCCAAGTCGGGCACCAATTGGCACCCCGTCAAAAGCAGTTGACCATACCGAAAGTCCTGGGAGTACTGGCAGGTCCTCCCCAAATGTTGGGAATGCGCCTGATCATAATTCACGGAACATACCATCACCGCCCATCGATGAATGGAAAGGATTGCTAGTTGATTCCCAGCAGGAGCCTTGTAGCCCAAGTTTAAGCTTTTCTGAGAGAGAGAGGAAGTGGAAAGAAGAACTTGATCAGGAACTCGAGAGAAAGCGCGAAATGATGCGTCATGCTGGCATAGGCGGGAAAACATCATCTCCAAAGGATCGAGCCTTAAACCGGCAGAGAGAACGGACAAGATTTGCATCACCCAGCAAATGA 1956 0.4581 MQDIFGSVRRSLVFRATPENEEASLGGTLVDKINSCIRKSRVFSKPSPASPPMPPVTKESSPMIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTFTQQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSIGAKDFLSKCLQKEPGLRPSASELLQHPFVTGEQLGSFPGSYTAMGKFEASSTSWSSNIETTSTVHPEEENKDYWGMGNDDDMCEIDDKDELSEGAVKFRSSISENIMSFNPMSDPSDDWSCKFVGSPERDRSGVSITTDEMFKPSDHLEASHEEHRDFSLSGEPSVSEDDDELTESKIQAFLDEKALGLKKLQTPLYEEFYNSLNTSCSPSAVEKTNDETTSKFLKLPPKSRSPSRAPIGTPSKAVDHTESPGSTGRSSPNVGNAPDHNSRNIPSPPIDEWKGLLVDSQQEPCSPSLSFSERERKWKEELDQELERKREMMRHAGIGGKTSSPKDRALNRQRERTRFASPSK 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02887 651 Gene3D Transferase(Phosphotransferase) domain 1 65 362 - -
Accr5g02887 651 SUPERFAMILY Protein kinase-like (PK-like) 65 329 IPR011009 -
Accr5g02887 651 MobiDBLite consensus disorder prediction 505 651 - -
Accr5g02887 651 MobiDBLite consensus disorder prediction 597 623 - -
Accr5g02887 651 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 53 338 - -
Accr5g02887 651 MobiDBLite consensus disorder prediction 634 651 - -
Accr5g02887 651 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02887 651 FunFam Mitogen-activated protein kinase kinase kinase 2 65 356 - -
Accr5g02887 651 Coils Coil 99 126 - -
Accr5g02887 651 CDD STKc_MAPKKK 65 328 - -
Accr5g02887 651 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Accr5g02887 651 MobiDBLite consensus disorder prediction 546 570 - -
Accr5g02887 651 MobiDBLite consensus disorder prediction 505 527 - -
Accr5g02887 651 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02887 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Accr5g02887 651 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02887 651 MobiDBLite consensus disorder prediction 447 462 - -
Accr5g02887 651 MobiDBLite consensus disorder prediction 447 472 - -
Accr5g02887 651 FunFam Serine/threonine-protein kinase STE11 62 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02887 Accr-Chr5 54407216 54412255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02887 1 651 MAP Kinase Kinase Kinase AT1G54960 57.593 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr5g02887 Pkinase 2.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02887 K20606 - gmx:100779001 977.622