Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02886 ATGCAAGACATTTTTGGATCAGTTCGCCGATCACTGGTGTTTCGTGCTACGCCGGAGAACGAAGAAGCCTCACTAGGAGGAACCCTAGTTGATAAGATCAATTCTTGCATTCGCAAGTCCAGAGTCTTCTCTAAACCTTCTCCCGCGTCTCCGCCAATGCCACCCGTCACAAAGGAATCTTCACCGATGATCCGATGGCGCAAAGGCGAGTTGATCGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCAGTTAAACAGGTTCTGATCGCGGCTAGCAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCTCATCCCAATATTGTTAGATATTTGGGCACAGTTAGGGAGGAGGACACCTTAAATATTCTTCTGGAGTTTGTACCAGGTGGATCCATATCATCACTTTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTTATTAGAACTTTCACGCAGCAGTTACTGCTGGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTTGATAATAAAGGGTGCATAAAACTTGCAGATTTTGGGGCGTCCAAACAGGTCGTTGAGCTGGCTACCATTTCCGGTGCCAAGTCTATGAAGGGCACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGCCATAGCTTCTCGGCTGATATATGGAGCGTTGGCTGTACTGTGATTGAAATGGCCACTGGAAAACCTCCCTGGAGCCAGCAGTACCAAGAGGTTGCCGCTCTCTTCCACATAGGAACAACAAAGTCTCATCCACCAATTCCGGACCATCTCTCTATTGGAGCAAAAGATTTTCTATCAAAATGTTTGCAGAAGGAACCAGGGTTAAGGCCATCAGCATCAGAACTGCTCCAGCATCCTTTTGTTACTGGTGAACAATTGGGTTCATTTCCTGGGTCATATACCGCAATGCAGGGAAAATTTGAAGCTTCTTCAACGTCTTGGTCCTCAAACATCGAAACTACCTCAACTGTACATCCTGAGGAAGAAAATAAAGACTATTGGGGAATGGGCAATGATGACGACATGTGTGAGATTGATGACAAAGATGAGTTATCTGAGGGGGCTGTTAAATTTAGATCCTCGATATCAGAAAATATAATGAGTTTCAACCCAATGTCTGATCCCTCTGATGATTGGAGTTGCAAATTTGTTGGGAGTCCAGAACGGGATCGTAGTGGAGTTAGTATTACCACTGACGAAATGTTCAAGCCTTCTGATCACCTGGAGGCTTCCCATGAGGAACACAGAGATTTTTCCCTTTCAGGTGAACCATCAGTGTCTGAGGATGATGATGAGCTCACGGAGTCAAAAATACAAGCCTTTTTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTCTACAACAGTTTAAATACTTCTTGTTCTCCCAGTGCGGTTGAGAAAACGAATGATGAAACTACTTCAAAGTTCTTGAAATTACCTCCGAAAAGCAGGTCCCCAAGTCGGGCACCAATTGGCACCCCGTCAAAAGCAGTTGACCATACCGAAAGTCCTGGGAGTACTGGCAGGTCCTCCCCAAATGTTGGGAATGCGCCTGATCATAATTCACGGAACATACCATCACCGCCCATCGATGAATGGAAAGGATTGCTAGTTGATTCCCAGCAGGAGCCTTGTAGCCCAAGTTTAAGCTTTTCTGAGAGAGAGAGGAAGTGGAAAGAAGAACTTGATCAGGAACTCGAGAGAAAGCGCGAAATGATGCGTCATGCTGGCATAGGCGGGAAAACATCATCTCCAAAGGATCGAGCCTTAAACCGGCAGAGAGAACGGACAAGATTTGCATCACCCAGCAAATGA 1959 0.4584 MQDIFGSVRRSLVFRATPENEEASLGGTLVDKINSCIRKSRVFSKPSPASPPMPPVTKESSPMIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTFTQQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSIGAKDFLSKCLQKEPGLRPSASELLQHPFVTGEQLGSFPGSYTAMQGKFEASSTSWSSNIETTSTVHPEEENKDYWGMGNDDDMCEIDDKDELSEGAVKFRSSISENIMSFNPMSDPSDDWSCKFVGSPERDRSGVSITTDEMFKPSDHLEASHEEHRDFSLSGEPSVSEDDDELTESKIQAFLDEKALGLKKLQTPLYEEFYNSLNTSCSPSAVEKTNDETTSKFLKLPPKSRSPSRAPIGTPSKAVDHTESPGSTGRSSPNVGNAPDHNSRNIPSPPIDEWKGLLVDSQQEPCSPSLSFSERERKWKEELDQELERKREMMRHAGIGGKTSSPKDRALNRQRERTRFASPSK 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02886 652 MobiDBLite consensus disorder prediction 506 528 - -
Accr5g02886 652 MobiDBLite consensus disorder prediction 448 463 - -
Accr5g02886 652 FunFam Mitogen-activated protein kinase kinase kinase 2 65 357 - -
Accr5g02886 652 MobiDBLite consensus disorder prediction 448 473 - -
Accr5g02886 652 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02886 652 Coils Coil 99 126 - -
Accr5g02886 652 MobiDBLite consensus disorder prediction 506 652 - -
Accr5g02886 652 MobiDBLite consensus disorder prediction 598 624 - -
Accr5g02886 652 CDD STKc_MAPKKK 65 328 - -
Accr5g02886 652 MobiDBLite consensus disorder prediction 635 652 - -
Accr5g02886 652 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Accr5g02886 652 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02886 652 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 53 338 - -
Accr5g02886 652 MobiDBLite consensus disorder prediction 547 571 - -
Accr5g02886 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Accr5g02886 652 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02886 652 Gene3D Transferase(Phosphotransferase) domain 1 65 363 - -
Accr5g02886 652 SUPERFAMILY Protein kinase-like (PK-like) 65 364 IPR011009 -
Accr5g02886 652 MobiDBLite consensus disorder prediction 353 374 - -
Accr5g02886 652 FunFam Serine/threonine-protein kinase STE11 62 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02886 Accr-Chr5 54407216 54412255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02886 1 652 MAP Kinase Kinase Kinase AT1G54960 57.511 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr5g02886 Pkinase 2.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02886 K20606 - gmx:100779001 974.541