Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02884 ATGCAAATGCAAGACATTTTTGGATCAGTTCGCCGATCACTGGTGTTTCGTGCTACGCCGGAGAACGAAGAAGCCTCACTAGGAGGAACCCTAGTTGATAAGATCAATTCTTGCATTCGCAAGTCCAGAGTCTTCTCTAAACCTTCTCCCGCGTCTCCGCCAATGCCACCCGTCACAAAGGAATCTTCACCGATGATCCGATGGCGCAAAGGCGAGTTGATCGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCAGTTAAACAGGTTCTGATCGCGGCTAGCAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCTCATCCCAATATTGTTAGATATTTGGGCACAGTTAGGGAGGAGGACACCTTAAATATTCTTCTGGAGTTTGTACCAGGTGGATCCATATCATCACTTTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTTATTAGAACTTTCACGCAGCAGTTACTGCTGGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTTGATAATAAAGGGTGCATAAAACTTGCAGATTTTGGGGCGTCCAAACAGGTCGTTGAGCTGGCTACCATTTCCGGTGCCAAGTCTATGAAGGGCACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGCCATAGCTTCTCGGCTGATATATGGAGCGTTGGCTGTACTGTGATTGAAATGGCCACTGGAAAACCTCCCTGGAGCCAGCAGTACCAAGAGGTTGCCGCTCTCTTCCACATAGGAACAACAAAGTCTCATCCACCAATTCCGGACCATCTCTCTATTGGAGCAAAAGATTTTCTATCAAAATGTTTGCAGAAGGAACCAGGGTTAAGGCCATCAGCATCAGAACTGCTCCAGCATCCTTTTGTTACTGGTGAACAATTGGGTTCATTTCCTGGGTCATATACCGCAATGCAGGGAAAATTTGAAGCTTCTTCAACGTCTTGGTCCTCAAACATCGAAACTACCTCAACTGTACATCCTGAGGAAGAAAATAAAGACTATTGGGGAATGGGCAATGATGACGACATGTGTGAGATTGATGACAAAGATGAGTTATCTGAGGGGGCTGTTAAATTTAGATCCTCGATATCAGAAAATATAATGAGTTTCAACCCAATGTCTGATCCCTCTGATGATTGGAGTTGCAAATTTGTTGGGAGTCCAGAACGGGATCGTAGTGGAGTTAGTATTACCACTGACGAAATGTTCAAGCCTTCTGATCACCTGGAGGCTTCCCATGAGGAACACAGAGATTTTTCCCTTTCAGGTGAACCATCAGTGTCTGAGGATGATGATGAGCTCACGGAGTCAAAAATACAAGCCTTTTTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTCTACAACAGTTTAAATACTTCTTGTTCTCCCAGTGCGGTTGAGAAAACGAATGATGAAACTACTTCAAAGTTCTTGAAATTACCTCCGAAAAGCAGGTCCCCAAGTCGGGCACCAATTGGCACCCCGTCAAAAGCAGTTGACCATACCGAAAGTCCTGGGAGTACTGGCAGGTCCTCCCCAAATGTTGGGAATGCGCCTGATCATAATTCACGGAACATACCATCACCGCCCATCGATGAATGGAAAGGATTGCTAGTTGATTCCCAGCAGGAGCCTTGTAGCCCAAGTTTAAGCTTTTCTGAGAGAGAGAGGAAGTGGAAAGAAGAACTTGATCAGGAACTCGAGAGAAAGCGCGAAATGATGCGTCATGCTGGCATAGGCGGGAAAACATCATCTCCAAAGGATCGAGCCTTAAACCGGCAGAGAGAACGGACAAGATTTGCATCACCCAGCAAATGA 1965 0.458 MQMQDIFGSVRRSLVFRATPENEEASLGGTLVDKINSCIRKSRVFSKPSPASPPMPPVTKESSPMIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTFTQQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSIGAKDFLSKCLQKEPGLRPSASELLQHPFVTGEQLGSFPGSYTAMQGKFEASSTSWSSNIETTSTVHPEEENKDYWGMGNDDDMCEIDDKDELSEGAVKFRSSISENIMSFNPMSDPSDDWSCKFVGSPERDRSGVSITTDEMFKPSDHLEASHEEHRDFSLSGEPSVSEDDDELTESKIQAFLDEKALGLKKLQTPLYEEFYNSLNTSCSPSAVEKTNDETTSKFLKLPPKSRSPSRAPIGTPSKAVDHTESPGSTGRSSPNVGNAPDHNSRNIPSPPIDEWKGLLVDSQQEPCSPSLSFSERERKWKEELDQELERKREMMRHAGIGGKTSSPKDRALNRQRERTRFASPSK 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02884 654 Pfam Protein kinase domain 69 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02884 654 MobiDBLite consensus disorder prediction 549 573 - -
Accr5g02884 654 SUPERFAMILY Protein kinase-like (PK-like) 67 366 IPR011009 -
Accr5g02884 654 SMART serkin_6 68 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02884 654 MobiDBLite consensus disorder prediction 508 654 - -
Accr5g02884 654 MobiDBLite consensus disorder prediction 355 376 - -
Accr5g02884 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Accr5g02884 654 ProSiteProfiles Protein kinase domain profile. 68 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02884 654 FunFam Serine/threonine-protein kinase STE11 64 158 - -
Accr5g02884 654 CDD STKc_MAPKKK 67 330 - -
Accr5g02884 654 MobiDBLite consensus disorder prediction 508 530 - -
Accr5g02884 654 MobiDBLite consensus disorder prediction 450 465 - -
Accr5g02884 654 MobiDBLite consensus disorder prediction 450 475 - -
Accr5g02884 654 FunFam Mitogen-activated protein kinase kinase kinase 2 67 359 - -
Accr5g02884 654 Gene3D Transferase(Phosphotransferase) domain 1 67 365 - -
Accr5g02884 654 MobiDBLite consensus disorder prediction 600 626 - -
Accr5g02884 654 MobiDBLite consensus disorder prediction 637 654 - -
Accr5g02884 654 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 55 340 - -
Accr5g02884 654 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Accr5g02884 654 Coils Coil 101 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02884 Accr-Chr5 54407210 54412255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02884 3 654 MAP Kinase Kinase Kinase AT1G54960 57.511 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr5g02884 Pkinase 2.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02884 K20606 - gmx:100779001 974.541