Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02874 ATGGCACCAACAAGGAAATCGAGAAGTGTGAATAAACGGTTTTCAGGTTTAAATGAGGCCTCTCCAGATAAGGATGGAGTTAACTCAAATAAAAATAAGAATCGGAAGAAAAAGTTGTCTGACAAATTGGGATCTCAATGGAGCAAGGAGGAACTAGAGCGTTTTTATGAAGCATACAGGAAGCATGGGAAAGATTGGAAGAAGGTATCTGCTGCTGTACGGAACAGATCCACTGAAATGGTGGAGGCTCTTTATAATATGAATAGGGCGTATTTATCTCTTCCTGAGGGGACAGCTTCTGTGGTTGGTCTCATAGCAATGATGACTGATCATTATAATGTGCTGGAAGGGAGTGATAGTGATAAGGAGAGCAGTGATGCACCCGAGTCTCAAAAACATTTAAAACGGAAGCGTGGGAAAGTTCAACTTATTTTTCCTAAAGATTCTGTTCAAAGTCATTCAGTTGCTTCTAACGATGGTTGTCTCTCTTTATTGAAGAAAAGACACTTTGATGGTAGCCAGCCTCGTGCGGTTGGAAAGCGAACACCTCGTGTCCCAGTTTCCCATTCTCATAAAAAATTTGATCGGGATTTTGTTTCACCAATTAAAAGAAGCCTGAAGTCAGAGAGTAATGCTAATGATGATGAAGTTGCTCATGTTGCAGCTCTGGCTTTAACTGAGGCTGCACAAAGAGGAGGCTCTCCTCATATTTCTCAAACTCAGTATAGAAGAGCAGAGCAGAAATCCTCTCCTGTTCAAAGCTGGGAAAAAATGCCGAAGACAGCTCGTTCCAAGTTTCATGATGCATCTGCGGGTGAAGAGTGCTTGGAAGGTAGTGTAGAAAGTGGGGAGGCTGAAAATGGAGAATATGCTAGAGATACTAGTCCATTGATGGACATGGAAGGTTTTGGCACGGTTGAAGTACATCAGAAGGGGAAGAAAATTTACAGAAAGAAAGAGAGAGCAGAAAATGTTCGAAGTTATCAGCTTGATGATGGTGGCGAGGCATGTAGTGGCACTGAAGAAGGACTTTATTTTAATTCGTTGAAGGAAAAGGTTGATAGTGAGGTTACTAATGCCAAACCTGAGCAATTCTCTCCTCAAGGTCAGAGGAAACGAAGCAAAAAACTTTTCTTTGGAGATGAAAGCTCTGCCTTGGATGCTTTACAAACTCTGGCTGATCTGTCTTTAATGATGCCAGTGTCTACAATGAATTCTGAGTCATTGGTCCAGTTGAAGGACGAAAGAATGACTGTTCATAAAGATGACAAGTCTGCTTTGCGTGAATCTACGTTTACAAGTCAAAACAGAGATAAACTTAAACTCCAAGGTTCAAAACAAAAGGCACTTCATGCAGTTCCTGGAATTGAGGCTTCAAACTCGAGAAAATCTAAACTTGGACGTGAGTTAGAAAACGAAAGGAATGCTTCAGCTGAATCAAAAGAACATATAACTCCTGATAGAACATGGAAAAGAAAGCGCAAATCTGTGGCCTCAAAGGCTGTATCTGAGGAAGAGAATAAACCAATGATTAAAGGAAAACAGAGTGGTCAGGTTTTTGCTCTCCCCAAACAAGTGAAACCGGTCAAATCATCGGAGAGCTCCTTGTGCAGTGATCCAAAAGATTTAACAGCATCAACTGCAGAAATTCCGCTAGCAAGTGAAGTTAGTTTACCAAATAAAAAAGGTAGACGTAAGATGAGTCTACAGAAGACATTCAATATGAAAGAGAAATCTTCTGAGAACATATTGAAAAAGCAACCTAGTAAGTATTCTTCTGGCCTTCAAGACAGGGCTTCATATTTAAAGGGAAAGCTTTCTGGTTGCTTGTCCTCATACATGGTTCGCAGGTGGTGTACTTTTGAGTGGTTTTATAGTGCTATTGATTATCCATGGTTTGCCAAACGGGAATTCATGGAGTACTTAAACCATGTTGGTCTAGGGAATATCCCAAGGCTAACTCGTGTTGAGTGGAGCGTTATAAAAAGTTCCCTGGGGAAACCTCGCAGGTTTTCTGAGCATTTTCTTCGTGAAGAAAGACAAAAGCTTGAACTGTATAGGGAATCTGTGAGGAAACATTACACTGAACTACGCACCGGTATCAGGGATGGACTCCCAACAGATTTAGCAAGACCTTTATTTGTTGGACAACGAGTAATTGCTATTCACCCCAAATCAAGGGAGGTTCATGATGGGAGTGTTCTTACTGTTGACCATGACAAATGCAGGGTTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCATGGATATTGATTGCATGCCTATGAATCCCGTGGATAATATGCCAGAAGCTCTGAGAAGACAGATTGGTGCTGGCAGAGTTTCTTACATGGGCAAACAGCTTCAGATAAATGAAATTTCTAATTTTGAGGGTGCGGTGACATGTGGTTCAGGTGTACCCCTGGAGAAGCTACCCGCCCCTTCAAGTACTTTGGAGGATGTTAATCATGTTGTTGCCCAAACAAAGGTTGGAACCATTGATAACGTTGATACACTACAAGAAGCATATGCTCAGCCACATCATCAAGCTAGAGAAGCTGATATACGTGCCCTTTCTGAACTGACTCTTGCTCTAGATAAAAAGGAAAAATTGTTAATGGAGCTTAGAAATGCAAATAATGACATGTCGGAAAACCAAAATGACATAGACTACTTTAAAGATTCAGAGTCTTTCAAAAAGCATTACGCCACGGTTTCTTCTGCCCTGCTTAATTTGAGGCAACGAAATACTTACACGGGAAACTCTCCATCACCATGGGTGAAGGCCCCAGCAAGTTTCAGTGTTCAAGACGATCTTCCATGTGCACTAGATAGTTCCCTAACGCAAGAGTTAGCATCAAGTGTTATTGAAATTATCAAAGGATCCAGACTAAGAGCTCATGCCATGGTAGATGCTGCAATTCAGACATTGTCTTCAACAAAAGAAGGTGAAGATGCTTTCATTAAGATAGGGCAAGCATTGGATTCCATTGACTATCAGCAGTTGGCCTCCAACTCTAAAGTGAATGGCAGTTTTGGTCACCATGATCAGTCAATTTGCTGCGCATCAGAAACTCTACAGAGTGATACATCAGGTCCGAAATTGCCGAATGATTCCCACAAAGTTGATATTCAAATTCCTTCTGAGCTCATTACATCCTGTGTTTCTACTTTGATCATGATTCAGACTTGTACTGAACGGCAATACCCACCAGCTGATGTTGCTCATATATTAGATTCGGCCGTTAACAGCCTGCATCCTTGCTGTCCTCAAAATCTTCCTATATACAGGGAAATTAAGATGTGCATGGGACGAATTAAGACCCAGATTTTAGCTCTCATTCCAACTTGA 3357 0.4135 MAPTRKSRSVNKRFSGLNEASPDKDGVNSNKNKNRKKKLSDKLGSQWSKEELERFYEAYRKHGKDWKKVSAAVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSDKESSDAPESQKHLKRKRGKVQLIFPKDSVQSHSVASNDGCLSLLKKRHFDGSQPRAVGKRTPRVPVSHSHKKFDRDFVSPIKRSLKSESNANDDEVAHVAALALTEAAQRGGSPHISQTQYRRAEQKSSPVQSWEKMPKTARSKFHDASAGEECLEGSVESGEAENGEYARDTSPLMDMEGFGTVEVHQKGKKIYRKKERAENVRSYQLDDGGEACSGTEEGLYFNSLKEKVDSEVTNAKPEQFSPQGQRKRSKKLFFGDESSALDALQTLADLSLMMPVSTMNSESLVQLKDERMTVHKDDKSALRESTFTSQNRDKLKLQGSKQKALHAVPGIEASNSRKSKLGRELENERNASAESKEHITPDRTWKRKRKSVASKAVSEEENKPMIKGKQSGQVFALPKQVKPVKSSESSLCSDPKDLTASTAEIPLASEVSLPNKKGRRKMSLQKTFNMKEKSSENILKKQPSKYSSGLQDRASYLKGKLSGCLSSYMVRRWCTFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLREERQKLELYRESVRKHYTELRTGIRDGLPTDLARPLFVGQRVIAIHPKSREVHDGSVLTVDHDKCRVQFDRPELGVEFVMDIDCMPMNPVDNMPEALRRQIGAGRVSYMGKQLQINEISNFEGAVTCGSGVPLEKLPAPSSTLEDVNHVVAQTKVGTIDNVDTLQEAYAQPHHQAREADIRALSELTLALDKKEKLLMELRNANNDMSENQNDIDYFKDSESFKKHYATVSSALLNLRQRNTYTGNSPSPWVKAPASFSVQDDLPCALDSSLTQELASSVIEIIKGSRLRAHAMVDAAIQTLSSTKEGEDAFIKIGQALDSIDYQQLASNSKVNGSFGHHDQSICCASETLQSDTSGPKLPNDSHKVDIQIPSELITSCVSTLIMIQTCTERQYPPADVAHILDSAVNSLHPCCPQNLPIYREIKMCMGRIKTQILALIPT 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02874 1118 ProSiteProfiles Myb-like domain profile. 45 86 IPR001005 -
Accr5g02874 1118 MobiDBLite consensus disorder prediction 420 513 - -
Accr5g02874 1118 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 81 IPR017930 -
Accr5g02874 1118 MobiDBLite consensus disorder prediction 232 257 - -
Accr5g02874 1118 Pfam DIRP 623 724 IPR033471 -
Accr5g02874 1118 MobiDBLite consensus disorder prediction 230 286 - -
Accr5g02874 1118 MobiDBLite consensus disorder prediction 1 44 - -
Accr5g02874 1118 Coils Coil 860 890 - -
Accr5g02874 1118 Gene3D - 4 99 - -
Accr5g02874 1118 SMART DIRP_2 624 725 IPR033471 -
Accr5g02874 1118 MobiDBLite consensus disorder prediction 26 44 - -
Accr5g02874 1118 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Accr5g02874 1118 PANTHER LIN-9 1 1118 IPR010561 GO:0006351|GO:0017053
Accr5g02874 1118 MobiDBLite consensus disorder prediction 462 511 - -
Accr5g02874 1118 FunFam Protein ALWAYS EARLY 3 isoform A 3 99 - -
Accr5g02874 1118 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Accr5g02874 1118 SMART sant 43 91 IPR001005 -
Accr5g02874 1118 MobiDBLite consensus disorder prediction 260 274 - -
Accr5g02874 1118 SUPERFAMILY Homeodomain-like 42 90 IPR009057 -
Accr5g02874 1118 Coils Coil 456 476 - -
Accr5g02874 1118 MobiDBLite consensus disorder prediction 116 133 - -
Accr5g02874 1118 CDD SANT 47 81 IPR001005 -
Accr5g02874 1118 MobiDBLite consensus disorder prediction 1 25 - -
Accr5g02874 1118 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02874 Accr-Chr5 54319225 54326992 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr5g02874 DIRP 4.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02874 - - qsa:O6P43_011108 1474.14