Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02870 ATGGATCATGCTCGATCGACCTCGGGGAATGCCGAGGATAGCGTAGGGATTCCAGATGACTTGCGATGTAAGAGGTCGGATGGGAAACAGTGGAGATGCACTGCAATGTCCATGCCAGATAAAACTGTCTGTGAGAAGCACTATATCCAGGCAAAGAAGAGGGCAGCTAATTCTGCCATGAGAGCTAGTCTTAAGAAGGCTAAGAGAAAGTCATTAGGTGACAGTGACATTTATCTAGAGAGCAAGAGTGATGATGTTGACATGCCACTCGCAAGCATGAAAGTTGAACAGCATTCGGCCTCTGGAAAGAACAAGGCATCAAAAAATCAGTTCCGATATACAGCAGAGACACCAACCACAAGGACCCCCTCCGGACGCAATGCCCCAAAGCTAAATGACGATTCACAAGATGATATTCCCCAGTATGAAGAAAATTGGATGTCTTATGAGTCACCACCTGCTTCTCGAATGGACTTAACCAGGAAAAGATCTCAAAGAAATTTAGATGTCAATGCTGCTACAGAATACTCGGATGGAAGTACAGATTCATCTGATGACACTGGTGGGCAAACTTGCCATCAATGTCGAAGGAATGATAGAGACAGAGTTATTTGGTGTTTAAGATGTGATAGGAGAGGATACTGTGAAAGCTGTATATTAACATGGTATTCAGACATGTCATTGGATGAAATTCAGATGACTTGTCCTGCCTGCCGTGGCACCTGTAATTGCAAAATTTGCTTACGTGGTGATAATTCAATCAAGGTTCGGATTCGGGAGATACCTGTTCTAGACAAGTTACAATATCTCCACGTGCTGCTGTCATCAGTACTTCCTGTGGTAAAGCAGATCCATCAGGAGCAGTGTTATGAAGTTGAACTTGAAAAGAAGTTGCGTGGGATTGAAATAGATCTTCCCAGGACAAAACTGAATGCAGATGAGCAAATGTGCTGTAATTTCTGTCGGATACCCATTACTGATTATCACCGACACTGCCCAAATTGTACATATGATTTATGCCTTAATTGCTGTCAAGATCTTCGAGAGGCAAATGTAAATCCAGAAAAAATAACCCCAACAGATGAAGCAAAACTTTCAAATCAAAATTTGCTATATAAGTTGCCTGATTGGAGATCCAACAGTGACGGTAGCATTCCATGTCCCCCGAAGAAATATGGTGGCTGTGGTTATTCACCATTGAATTTAAGCCGCATCTTCAAGATGAATTGGGTTGCAAAATTGGTGAAAAATGCAGAGGAGATGGTTAGTGGCTGCCAGATTAATGAAATTGGAGGATCAGAAACCAATTTGAATGATCTCAAACTTTACCAATATTCTCACAGGGAGGTCAATGATGATAATTTTCTGTACTGTCCAGCATCTGAAGATCTCAAAACTGATGGGATAGGAAATTTCAGAAAGCACTGGAAAAATGGTGAACCCATAATCGTCAAGCAAGTATTTGATAGGTCATCAAGCTGGGATCCAATGGCTATATGGCGAGGAGTTCGAGAGACAGCAGATGAGAAAATGAAAGAAACTGAGAACAGGGTGGTTAAGGCTATGGATTGTTTAACCTGGTCAGAGATAGATATTGAACTCAATGAATTCATGAAAGGGTACTTTGAGGGGCGTACCCATGAGAATGGTTTGCCACAATTATTGAAGTTGAAGGATTGGCCTTCACCTAGTGCATCTGAAGAATTTTTATTGCAGCAAAGACCTGAATTTATCCGCAAGCTGCCTTTACTTGAATATATTCACTCAAAGTGGGGCCTTCTTAATGTTGCAGCTAAATTGCCTCATTACTCCTTAGAAAATGATGTAGGACCCAAGATTTATATATCATATGGGGTCAATGAGGAACTTGGTAATGGTGACTCAGTGACCAATCTCCACTTCAATATGCGTGACATGGTCTATCTTTTGGTCCATACAAGTGAAGTGAAGCCAAAGAACTTGCAGGGAATAAAAAGTGAAAAGATACAGAAATCATTGGATGAAAATGAATTGCCTGTGGATCCACAAATATCTTCAGTGGCGAGTCCAGCTGATTCATCACTGGGCACCGAGAAAAACGGACTGGATTTGGATTCAAATGAGAAAACGTCAATTATCAATAAAGGGTTTGAAAATTATTCTAGTGCAGAAGGGGATATGATCAATTCCGAGCTTCCAGTCAAGGATGGAGATATCGGGGAGGAAACAGATCCTGGAGTTCTTTGGGATGTCTTTCGTCGGCAGGATGTTCCAAAGCTAACTGAATTTTTAAAAACACATTGGAAAGAATTTGCGCAGCCAGATTATATAGTAAATAAATTTGATGCAAGGCCTCTTTATGATGGAGTTATCTTTCTCAACAGACGCCATAAAAGGAAGTTGAAGGAAGAATTTGGAGTGGAGCCATGGTCATTTGAACAGTGTGTGGGGGAAGCTGTATTTGTTCCTGCAGGGTGCCCTTTTCAAGCAAGAAATGTTCAGTCCACTGTTCAGCTGGGCCTTGATTTCTTATCGCCGGAAAGCTTGGGGGAGGCTGTGAGATTGGCTGAGGATGTCCGCCGTCTGCCAAATGAACATGAAGCCAAGCATCAAGTATTGGAGGTTGGGAAGATATCACTTTATGCCGCAAGTTCAGCCATCAAAGAAGTTCAGAAACTCGTTCTTGACCCAAAACTTGGTGCAGAGATTGGATTTGGGGACCCTAAGTTGACTGCAATGGTTGCTGAGAACTACGAGAAGATGGTTAAGCGAAGACAGATTTCTTGTGCTTGA 2772 0.4203 MDHARSTSGNAEDSVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRASLKKAKRKSLGDSDIYLESKSDDVDMPLASMKVEQHSASGKNKASKNQFRYTAETPTTRTPSGRNAPKLNDDSQDDIPQYEENWMSYESPPASRMDLTRKRSQRNLDVNAATEYSDGSTDSSDDTGGQTCHQCRRNDRDRVIWCLRCDRRGYCESCILTWYSDMSLDEIQMTCPACRGTCNCKICLRGDNSIKVRIREIPVLDKLQYLHVLLSSVLPVVKQIHQEQCYEVELEKKLRGIEIDLPRTKLNADEQMCCNFCRIPITDYHRHCPNCTYDLCLNCCQDLREANVNPEKITPTDEAKLSNQNLLYKLPDWRSNSDGSIPCPPKKYGGCGYSPLNLSRIFKMNWVAKLVKNAEEMVSGCQINEIGGSETNLNDLKLYQYSHREVNDDNFLYCPASEDLKTDGIGNFRKHWKNGEPIIVKQVFDRSSSWDPMAIWRGVRETADEKMKETENRVVKAMDCLTWSEIDIELNEFMKGYFEGRTHENGLPQLLKLKDWPSPSASEEFLLQQRPEFIRKLPLLEYIHSKWGLLNVAAKLPHYSLENDVGPKIYISYGVNEELGNGDSVTNLHFNMRDMVYLLVHTSEVKPKNLQGIKSEKIQKSLDENELPVDPQISSVASPADSSLGTEKNGLDLDSNEKTSIINKGFENYSSAEGDMINSELPVKDGDIGEETDPGVLWDVFRRQDVPKLTEFLKTHWKEFAQPDYIVNKFDARPLYDGVIFLNRRHKRKLKEEFGVEPWSFEQCVGEAVFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEDVRRLPNEHEAKHQVLEVGKISLYAASSAIKEVQKLVLDPKLGAEIGFGDPKLTAMVAENYEKMVKRRQISCA 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02870 923 Gene3D Cupin 447 862 - -
Accr5g02870 923 MobiDBLite consensus disorder prediction 668 696 - -
Accr5g02870 923 MobiDBLite consensus disorder prediction 94 138 - -
Accr5g02870 923 MobiDBLite consensus disorder prediction 167 191 - -
Accr5g02870 923 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 185 252 IPR018866 -
Accr5g02870 923 MobiDBLite consensus disorder prediction 167 192 - -
Accr5g02870 923 SUPERFAMILY Clavaminate synthase-like 473 863 - -
Accr5g02870 923 ProSiteProfiles JmjC domain profile. 589 853 IPR003347 -
Accr5g02870 923 MobiDBLite consensus disorder prediction 97 130 - -
Accr5g02870 923 Pfam WRC 18 58 IPR014977 -
Accr5g02870 923 MobiDBLite consensus disorder prediction 1 21 - -
Accr5g02870 923 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 19 887 IPR045109 GO:0032454|GO:0033169
Accr5g02870 923 SMART cupin_9 570 853 IPR003347 -
Accr5g02870 923 MobiDBLite consensus disorder prediction 675 696 - -
Accr5g02870 923 Pfam JmjC domain, hydroxylase 739 832 IPR003347 -
Accr5g02870 923 ProSiteProfiles WRC domain profile. 17 61 IPR014977 -
Accr5g02870 923 ProSiteProfiles Zinc finger RING-type profile. 192 239 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02870 Accr-Chr5 54275665 54281647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02870 18 58 GRF Transcription Factor Family AT3G13960 46.341 2.35e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr5g02870 JmjC 4.2e-07 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02870 K15601 - gmx:100792166 1362.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02870 5 54275665 54281647 Accr5g02870 5 54275665 54281647 ECH