Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02843 ATGTCGGGCGACGGACTGAACAAAAGGAGATTAGCCATCATTGGCGTCTCTTCGGTGTTGCTGGTGGCACTGGTGGTGGCCGTGACGGTTGGCGTGACATGGAGTAAATCAGGGTCGGACGAGGATGACAGGAGCTCCAACAAGGTGGTGTCTAACAGGGTGAAAGCAGTGCAGAACCTGTGCGCGCCCACGGACTACAAGAAAGAATGCGAGGAGAGCCTGGTGGCGGACGGCGGCAACAGCACCGACCCAAAACAACTCATCATGAGCGCCTTCAACATCACCATCAAGAAGATTGAGAAGGGTATTCATGAATCCAATCTCTTGCACGAGGCCGAGAAGGATCCACGATCCAAGGAGGCCCTCCAAACCTGCAAGCAACTCATGGATCTTTCCATCGGCGAGTTCAGGAAATCACTCGCCACCTTCCAGACCTTCGATTTCTATAGCCTCGACAAGATTCTCATGAACCTCAAGGTCTGGCTTAGCGGCGCCATCACCTACCAGGAAACCTGCATCGAAGGCTTCGAGGAAGTCAAAAGCGACGCGGGTCTCAAGATGAAGCAGGCCCTCACATCCGCCATGCACATGAGCAGCAACGGCCTCGCCATCGTCAACGACATGGCCGAGGCTTTATCCAGCTTGCACATCACAAAACAAGGAAGGCGACTCCTTAATGATCAAGAGGACGACAACAGCGAAGGCAGCGAGGCGGCTGGGAACAAGGGCGGAGCCGCCGCCAGACCTGATGGCGGCGACTTTGATCTGCCCTCGTGGGTGGACGAGAATCCTGCCGCTCGGAGACTGATGACGACGAGCGAGCATAAGGGCAAACTGAAGCCTGATGTGGTGGTGGCCAAGGACGGGAGTGGGAAATACAAGAAAATCAAAGACGCGCTGAAGCACGTGCCCAAGAAGAACAAGAAGCCGTTTGTGATCTACATCAAGGAAGGAGAGTACAAAGAGCAGGTGGAGGTGGAGAAGCACATGACGTACGTTGTGTTCGTGGGGGATGGTGGCAACAAGACCCGCATCACCGGTAAAAAGAACTTCGCCGATGGGGTTGGTACCTACAAGACTGCCACGGTGGCCGTGGAAGGGGACAACTTCATCGCCATCAACATGGGGTTCGAGAACTCAGCCGGTCCCGACGGACATCAGGCCGTGGCACTTAGGGTTCAGTCCGACTTCTCCATATTCTACAAATGCCAAATAGATGGGTACCAGGACACGCTTTACGTGCACACCATGCGTCAGTTCTACAGGGACTGCGTCATCACCGGCACCATAGACTTCATCTTCGGTGATGCTGCCGTCGTCATGCAGAACTGCACATTCGTGGTGAGGAAGCCGAACGAGAACCAGCAGTGCATAGTGACGGCGCAGGGCAGGAAGGAGAGGCACCAGCCGTCGGCGCTAGTGATCCAGGGAGGGTCCATAGTGTCGGACCCAAAGTACTACAAAGTGAGGTTCAAGAACAAGGCTTACCTGGCGCGTCCATGGAAGAACTTCTCCAGGACCATCATAATGGAAACCTTCATAGACGACTTGATTCAGCCAGAGGGATTTCTCAAGTGGGACGCTAACGCCACATCCTACAAGACATGCTGGTACGGTGAGTTCAACAACACAGGGCCAGGTGCCGACATGAGTAATCGCGCCAAGTGGAACGGGATCAAGAATCTGACGGCTCAGCATTCCCTGGACTTCACGCCCCTCAGGTACTTCAAGACAGATTCCTGGATTAGGGACACTAGGATTCCTTACAATTCCGGCCCCATGTACCTCCCTGCCCTTAATTCCAAAAAGATCTCCTCTCACTGA 1824 0.5439 MSGDGLNKRRLAIIGVSSVLLVALVVAVTVGVTWSKSGSDEDDRSSNKVVSNRVKAVQNLCAPTDYKKECEESLVADGGNSTDPKQLIMSAFNITIKKIEKGIHESNLLHEAEKDPRSKEALQTCKQLMDLSIGEFRKSLATFQTFDFYSLDKILMNLKVWLSGAITYQETCIEGFEEVKSDAGLKMKQALTSAMHMSSNGLAIVNDMAEALSSLHITKQGRRLLNDQEDDNSEGSEAAGNKGGAAARPDGGDFDLPSWVDENPAARRLMTTSEHKGKLKPDVVVAKDGSGKYKKIKDALKHVPKKNKKPFVIYIKEGEYKEQVEVEKHMTYVVFVGDGGNKTRITGKKNFADGVGTYKTATVAVEGDNFIAINMGFENSAGPDGHQAVALRVQSDFSIFYKCQIDGYQDTLYVHTMRQFYRDCVITGTIDFIFGDAAVVMQNCTFVVRKPNENQQCIVTAQGRKERHQPSALVIQGGSIVSDPKYYKVRFKNKAYLARPWKNFSRTIIMETFIDDLIQPEGFLKWDANATSYKTCWYGEFNNTGPGADMSNRAKWNGIKNLTAQHSLDFTPLRYFKTDSWIRDTRIPYNSGPMYLPALNSKKISSH 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02843 607 FunFam Pectinesterase 53 209 - -
Accr5g02843 607 FunFam Pectinesterase 276 593 - -
Accr5g02843 607 ProSitePatterns Pectinesterase signature 2. 426 435 IPR033131 -
Accr5g02843 607 SUPERFAMILY Pectin lyase-like 280 590 IPR011050 -
Accr5g02843 607 PANTHER PECTINESTERASE 20 583 - -
Accr5g02843 607 Pfam Pectinesterase 282 577 IPR000070 GO:0030599|GO:0042545
Accr5g02843 607 MobiDBLite consensus disorder prediction 227 259 - -
Accr5g02843 607 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 208 IPR035513 -
Accr5g02843 607 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Accr5g02843 607 CDD PMEI-like_3 60 209 - -
Accr5g02843 607 SMART PMEI_2 52 204 IPR006501 GO:0004857
Accr5g02843 607 Gene3D - 276 593 IPR012334 -
Accr5g02843 607 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 209 IPR035513 -
Accr5g02843 607 NCBIfam pectinesterase inhibitor domain 45 207 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02843 Accr-Chr5 54118524 54120347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02843 8 592 Carbohydrate Esterase AT3G05610 47.782 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02843 K01051 - gmx:100801686 696.812