Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02842 ATGGCCCATCCCCTTCATTTCCTTTTCATTCTCATCCTCTTACCCTCCTTCAACACTGAAGCTTTCTTAGACGAAATCCCCTCCGACACCAGAAACCAGTTAGACCTGCACGCCATGATCGCCCAGGTCTGCATGGACGTCGAAGACCAGAACACGTGTCTCGCCAATATCCAAAACGAGATCGTCAAGCATGGCCCTCCGACCCCATCTTCCGTTGTGACCGCCGCACTCCGAGCCACTCTCAACGAAGCCGTGGGAGCCATTGACAAAATCTCCAAGTTCAGCACCTTCTCCATTAGCTATCGCGAGCAAGTAGCCATCCAAGACTGCAAGGAACTCCTTGATTTCTCGGTGTCGGAGCTGGCCTGGTCGCTGGGCGAGATGAGAACAATTCGTGCCGGTGATGACAGCGTTGATTATGACGGAGACCTCCAAGCTTGGCTAAGTGCGGCACTCAGCAACCAGGACACGTGTCTCGAGGGCTTCGAGGGCACCGACCGCCGTCTTCAGGGTTACATCAGCGGCAGCCTCACACAAGTCACACAGCTTATCAGTAACGTTTTGGCTTTGTACACTCAGTTGCATAGCTTACCCTTCAGACCTCCGGCGAATAACACCATATTAGCAAATGACCGGAGCTCCGAGTTTCCGGAATGGATGACGGAGAGTGATCAAGAGCTGATGAGATCTCGGCCGCGAGGCGAAGTGCATGCGGATGCTATTGTGGCGTTGGATGGGAGCGGCCATTACCGTTCCATCTCAGAAGCTGTGGATGCGGCTCCAATCCTGAGCAAAAGGAGGTATGTTATTTACGTGAAAAGTGGGATTTATAAAGAGAACGTGGATATGAAGAGGAAGAAGACCAACATCATGCTCGTAGGAGAAGGTATTGGCAAGACCATCGTTACGGGCAACCGCAATTTCATGCAAGGATGGACTACTTTTCGAACCGCCACTGTTGCTGTGTCGGGGAAGGGATTCATAGCGAGGGACATGTCATTTAGAAACACAGCAGGACCAGAGAATCATCAGGCGGTGGCTCTGAGGGTGGATTCAGACCAATCAGCGTTCTTCAGGTGTAGCATAGAAGGTCACCAGGACACACTATATGCCCACTCACTCAGACAGTTCTACCGTGAATGCGAAATCTACGGCACCATAGACTTCATATTCGGGAACGGAGCCGCCGTACTGCAAAACTGTAAGTTATACACAAGAGTGCCGCTGCCATTGCAGAAGGTCACCATAACGGCGCAGGGCAGGAAAAGCCCACACCAGAGCACCGGGTTTATAATCCAGGACAGCTTTATTCTAGCCACTCAACCCACCTATTTGGGCAGGCCGTGGAAGCAGTTCTCCAGGGCGGTGTACATGAACACTTACATGAGCGGCCTTGTGCAGCCTCGAGGCTGGCTGGAGTGGGCCGGCAACTTTGCATTGAACACCTTGTGGTACGGCGAGTATAAGAACTATGGACCAGGTTCGTCCCTGGCTGGAAGGGTCAGGTGGCCCGGTTATCACATCATTAAAGATGCTGCCGCCGCCAACTACTTCACCGTTCAGAGCTTCATTGACGGCGCTACGTGGTTGCCCTCCACGGGGGTAAAGTTCACGGCTGGTTTGACCAATTAA 1632 0.5263 MAHPLHFLFILILLPSFNTEAFLDEIPSDTRNQLDLHAMIAQVCMDVEDQNTCLANIQNEIVKHGPPTPSSVVTAALRATLNEAVGAIDKISKFSTFSISYREQVAIQDCKELLDFSVSELAWSLGEMRTIRAGDDSVDYDGDLQAWLSAALSNQDTCLEGFEGTDRRLQGYISGSLTQVTQLISNVLALYTQLHSLPFRPPANNTILANDRSSEFPEWMTESDQELMRSRPRGEVHADAIVALDGSGHYRSISEAVDAAPILSKRRYVIYVKSGIYKENVDMKRKKTNIMLVGEGIGKTIVTGNRNFMQGWTTFRTATVAVSGKGFIARDMSFRNTAGPENHQAVALRVDSDQSAFFRCSIEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKLYTRVPLPLQKVTITAQGRKSPHQSTGFIIQDSFILATQPTYLGRPWKQFSRAVYMNTYMSGLVQPRGWLEWAGNFALNTLWYGEYKNYGPGSSLAGRVRWPGYHIIKDAAAANYFTVQSFIDGATWLPSTGVKFTAGLTN 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02842 543 NCBIfam pectinesterase inhibitor domain 3 195 IPR006501 GO:0004857
Accr5g02842 543 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 195 IPR035513 -
Accr5g02842 543 Pfam Plant invertase/pectin methylesterase inhibitor 39 190 IPR006501 GO:0004857
Accr5g02842 543 ProSitePatterns Pectinesterase signature 1. 264 283 IPR018040 -
Accr5g02842 543 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 195 IPR035513 -
Accr5g02842 543 FunFam Pectinesterase 233 541 - -
Accr5g02842 543 PANTHER PECTINESTERASE 17 531 - -
Accr5g02842 543 Pfam Pectinesterase 239 526 IPR000070 GO:0030599|GO:0042545
Accr5g02842 543 SMART PMEI_2 35 190 IPR006501 GO:0004857
Accr5g02842 543 Gene3D - 233 541 IPR012334 -
Accr5g02842 543 SUPERFAMILY Pectin lyase-like 237 540 IPR011050 -
Accr5g02842 543 FunFam Pectinesterase 37 196 - -
Accr5g02842 543 CDD PMEI-like_4 65 194 - -
Accr5g02842 543 ProSitePatterns Pectinesterase signature 2. 383 392 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02842 Accr-Chr5 54114781 54116564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02842 9 543 Carbohydrate Esterase AT3G05620 60.917 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02842 K01051 - gmx:100810565 884.404