Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02835 ATGGCGACGAGGAACCGCACTTTGCTCTACAGGAAGTACAGAGATGCATTGAAGAGCGTTCGGGTTCCGTCGAGTTCCGCCGGTGCTGGTGGTCCGGTGATTGAATTGGTCAGCACATCGCTTCTGAATCAGAATCGTTCTTATGCTCCGCTTAGTACTGAGGATCCGGGTAATTCAAGTAAGGGTCCACTTACTGTAGGACTACCTCCAGCTTGGGTGGATGTATCTGAAGAAATATCAGCAAATGTGCAACGGGCACGCACAAAAATGGCAGAATTGGCGAAAGCTCATGCAAAGGCTTTAATGCCATCATTTGGAGATGGTAAGGAGGAACAACGTGCCATTGAAACCCTAACTCATGAGATAACTGACTTGATAAAGAGATCAGAGAGGCGACTGCAGAGACTTTCTGCTACCGGGCCTTCTGAGGATTCCGGTGTGAGGAAGAACGTGCAGCGTTCTCTAGCTACTGACCTTCAGAACCTCTCTGTAGAGCTCCGCAAGAAACAATCAAATTATTTGAAGCGACTTAGGCAGCAAAAAGAGGTGGGTCAAGATGGGGTGGATCTAGAGATGAACATAAATGGAAGTAAATCCAGATTTGAAGATGATGCTTTGGACAATATGGTATTTAACGAGCATCAGATGGCCAAGCTGAAAAAAAGTGAAGCATTCACCGTTGAAAGAGAAAAGGAGATCCAACAGGTTGTGGAATCAGTAAACGAGCTTGCACAAATAATGAAAGATTTGTCTGTACTAGTAATAGACCAGGGAACCATTGTTGATCGAATAGACTACAACATCCAGAATGTTGCATCCTCGGTTGAGGATGGCCTGAAACAGCTGCAGAAGGCTGAGAGAACACAAAAGAAGGGGGGAATGGTGACGTGTGCGACGGTGCTTGTTATCATGTGCTTCGTTATGCTGGTTCTCTTAATCCTGAAGGAAATACTTTTGTGA 960 0.4562 MATRNRTLLYRKYRDALKSVRVPSSSAGAGGPVIELVSTSLLNQNRSYAPLSTEDPGNSSKGPLTVGLPPAWVDVSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEEQRAIETLTHEITDLIKRSERRLQRLSATGPSEDSGVRKNVQRSLATDLQNLSVELRKKQSNYLKRLRQQKEVGQDGVDLEMNINGSKSRFEDDALDNMVFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVASSVEDGLKQLQKAERTQKKGGMVTCATVLVIMCFVMLVLLILKEILL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02835 319 ProSitePatterns Syntaxin / epimorphin family signature. 229 268 IPR006012 GO:0005484|GO:0006886|GO:0016020
Accr5g02835 319 PANTHER SYNTAXIN 75 305 IPR045242 -
Accr5g02835 319 Pfam SNARE domain 259 311 IPR000727 -
Accr5g02835 319 CDD SNARE_syntaxin16 228 284 - -
Accr5g02835 319 SMART tSNARE_6 218 285 IPR000727 -
Accr5g02835 319 Gene3D - 69 277 - -
Accr5g02835 319 SMART SynN_4 63 178 IPR006011 GO:0016020
Accr5g02835 319 Coils Coil 76 96 - -
Accr5g02835 319 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 223 285 IPR000727 -
Accr5g02835 319 SUPERFAMILY t-snare proteins 68 278 IPR010989 GO:0016020|GO:0016192
Accr5g02835 319 FunFam Syntaxin-43 69 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02835 Accr-Chr5 54052026 54055113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02835 1 319 SNARE and Associated Proteins AT5G26980 76.380 0.0 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02835 K08489 - gmx:100796741 524.628