Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02834 ATGGCGACGAGGAACCGCACTTTGCTCTACAGGAAGTACAGAGATGCATTGAAGAGCGTTCGGGTTCCGTCGAGTTCCGCCGGTGCTGGTGGTCCGGTGATTGAATTGGTCAGCACATCGCTTCTGAATCAGAATCGTTCTTATGCTCCGCTTAGTACTGAGGATCCGGGTAATTCAAGTAAGGGTCCACTTACTGTAGGACTACCTCCAGCTTGGGTGGATGTATCTGAAGAAATATCAGCAAATGTGCAACGGGCACGCACAAAAATGGCAGAATTGGCGAAAGCTCATGCAAAGGCTTTAATGCCATCATTTGGAGATGGTAAGGAGGAACAACGTGCCATTGAAACCCTAACTCATGAGATAACTGACTTGATAAAGAGATCAGAGAGGCGACTGCAGAGACTTTCTGCTACCGGGCCTTCTGAGGATTCCGGTGTGAGGAAGAACGTGCAGCGTTCTCTAGCTACTGACCTTCAGAACCTCTCTGTAGAGCTCCGCAAGAAACAATCAAATTATTTGAAGCGACTTAGGCAGCAAAAAGAGGGTCAAGATGGGGTGGATCTAGAGATGAACATAAATGGAAGTAAATCCAGATTTGAAGATGATGCTTTGGACAATATGGTATTTAACGAGCATCAGATGGCCAAGCTGAAAAAAAGTGAAGCATTCACCGTTGAAAGAGAAAAGGAGATCCAACAGGTTGTGGAATCAGTAAACGAGCTTGCACAAATAATGAAAGATTTGTCTGTACTAGTAATAGACCAGGGAACCATTGTTGATCGAATAGACTACAACATCCAGAATGTTGCATCCTCGGTTGAGGATGGCCTGAAACAGCTGCAGAAGGCTGAGAGAACACAAAAGAAGGGGGGAATGGTGACGTGTGCGACGGTGCTTGTTATCATGTGCTTCGTTATGCTGGTTCTCTTAATCCTGAAGGAAATACTTTTGTGA 957 0.4556 MATRNRTLLYRKYRDALKSVRVPSSSAGAGGPVIELVSTSLLNQNRSYAPLSTEDPGNSSKGPLTVGLPPAWVDVSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEEQRAIETLTHEITDLIKRSERRLQRLSATGPSEDSGVRKNVQRSLATDLQNLSVELRKKQSNYLKRLRQQKEGQDGVDLEMNINGSKSRFEDDALDNMVFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVASSVEDGLKQLQKAERTQKKGGMVTCATVLVIMCFVMLVLLILKEILL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02834 318 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 222 284 IPR000727 -
Accr5g02834 318 Gene3D - 69 276 - -
Accr5g02834 318 SMART tSNARE_6 217 284 IPR000727 -
Accr5g02834 318 SMART SynN_4 63 178 IPR006011 GO:0016020
Accr5g02834 318 SUPERFAMILY t-snare proteins 68 277 IPR010989 GO:0016020|GO:0016192
Accr5g02834 318 Coils Coil 76 96 - -
Accr5g02834 318 CDD SNARE_syntaxin16 227 283 - -
Accr5g02834 318 ProSitePatterns Syntaxin / epimorphin family signature. 228 267 IPR006012 GO:0005484|GO:0006886|GO:0016020
Accr5g02834 318 PANTHER SYNTAXIN 75 304 IPR045242 -
Accr5g02834 318 FunFam Syntaxin-43 69 276 - -
Accr5g02834 318 Pfam SNARE domain 258 310 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02834 Accr-Chr5 54052026 54055113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02834 1 318 SNARE and Associated Proteins AT5G26980 76.615 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02834 K08489 - gmx:100796741 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02834 5 54052026 54055113 Accr5g02834 5 54052026 54055113 ECH
Accr2g03261 2 68225393 68230260 Accr5g02834 5 54052026 54055113 ECH