Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02832 ATGGATCTAAATGTGAAGGAATCTTCATCGGATGGATCGAGTGACATCAATAAGTGCTGCACTGATTGCAAAACCACTAAAACTCCACTCTGGAGAGGAGGTCCAGCTGGGCCCAAGACGCTATGCAACGCTTGTGGGATTAGATACAGGAAGAGAAGGGCTTCTCCGGTGGGATTGAACAAAGGGCTTGATAGGAAAAGAGATAGAACTAATAGTTCAAGCGGCGGCGTAGTTGATGCTGTTACCGTCGTGGCCATCTCGACATCTGCCGCAGCCTCTAGTGACAATCAGTGGAGGGAATCGTTGGAAATGAACATGGTAGGATGGGGTGAGGAGGTTTTGTTGCAGAGCGTGCCGGCTGTTTTGAAGAAACAGAGATGCCAGAGGAAAAGGAAATTAGGGGAAGTGGAGGAAGCGGCTTTCTGTTTGATGGCATTATCCTGTGGCTTTGTTTTCGCTTAG 462 0.4848 MDLNVKESSSDGSSDINKCCTDCKTTKTPLWRGGPAGPKTLCNACGIRYRKRRASPVGLNKGLDRKRDRTNSSSGGVVDAVTVVAISTSAAASSDNQWRESLEMNMVGWGEEVLLQSVPAVLKKQRCQRKRKLGEVEEAAFCLMALSCGFVFA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02832 153 ProSiteProfiles GATA-type zinc finger domain profile. 14 50 IPR000679 GO:0006355|GO:0043565
Accr5g02832 153 ProSitePatterns GATA-type zinc finger domain. 20 45 IPR000679 GO:0006355|GO:0043565
Accr5g02832 153 Pfam GATA zinc finger 20 53 IPR000679 GO:0006355|GO:0043565
Accr5g02832 153 Gene3D - 16 75 IPR013088 GO:0006355|GO:0008270
Accr5g02832 153 SMART GATA_3 14 64 IPR000679 GO:0006355|GO:0043565
Accr5g02832 153 CDD ZnF_GATA 20 67 IPR000679 GO:0006355|GO:0043565
Accr5g02832 153 PANTHER OS01G0976800 PROTEIN 7 152 - -
Accr5g02832 153 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 14 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02832 Accr-Chr5 54043032 54044242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02832 7 153 C2C2-Gata Transcription Factor Family AT5G49300 39.865 4.64e-25 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr5g02832 GATA 4e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02832 - - pcin:129306793 206.838