Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02831 ATGGAATCTTCATCGGATGGATCGAGTGACATCAATAAGTGCTGCACTGATTGCAAAACCACTAAAACTCCACTCTGGAGAGGAGGTCCAGCTGGGCCCAAGACGCTATGCAACGCTTGTGGGATTAGATACAGGAAGAGAAGGGCTTCTCCGGTGGGATTGAACAAAGGGCTTGATAGGAAAAGAGATAGAACTAATAGTTCAAGCGGCGGCGTAGTTGATGCTGTTACCGTCGTGGCCATCTCGACATCTGCCGCAGCCTCTAGTGACAATCAGTGGAGGGAATCGTTGGAAATGAACATGGTAGGATGGGGTGAGGAGGTTTTGTTGCAGAGCGTGCCGGCTGTTTTGAAGAAACAGAGATGCCAGAGGAAAAGGAAATTAGGGGAAGTGGAGGAAGCGGCTTTCTGTTTGATGGCATTATCCTGTGGCTTTGTTTTCGCTTAG 447 0.4899 MESSSDGSSDINKCCTDCKTTKTPLWRGGPAGPKTLCNACGIRYRKRRASPVGLNKGLDRKRDRTNSSSGGVVDAVTVVAISTSAAASSDNQWRESLEMNMVGWGEEVLLQSVPAVLKKQRCQRKRKLGEVEEAAFCLMALSCGFVFA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02831 148 ProSitePatterns GATA-type zinc finger domain. 15 40 IPR000679 GO:0006355|GO:0043565
Accr5g02831 148 Pfam GATA zinc finger 15 48 IPR000679 GO:0006355|GO:0043565
Accr5g02831 148 CDD ZnF_GATA 15 62 IPR000679 GO:0006355|GO:0043565
Accr5g02831 148 ProSiteProfiles GATA-type zinc finger domain profile. 9 45 IPR000679 GO:0006355|GO:0043565
Accr5g02831 148 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 9 48 - -
Accr5g02831 148 PANTHER OS01G0976800 PROTEIN 7 147 - -
Accr5g02831 148 Gene3D - 11 70 IPR013088 GO:0006355|GO:0008270
Accr5g02831 148 SMART GATA_3 9 59 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02831 Accr-Chr5 54043024 54044242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02831 1 148 C2C2-Gata Transcription Factor Family AT5G49300 39.597 2.18e-25 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr5g02831 GATA 3.7e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02831 - - pcin:129306793 195.282