Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02829 ATGTCGTATCGCCCTGCCGCTAACTCCAGGACTGAGGTCCGTCGGAGTCGATACAAGGTGGCCGTAGATGCCGAGGAAGGTCGGAGACGGCGAGAGGATACCATGGTCGAGATCCGAAAGATCCGTAGAGAAGAGAGTTTGCAGAAGAAGAGGCGCGAGGGCCTTCAAGCTCAGCAGATGCCTTCTTCCCTCCACTCTACTGCCGTAGAGAAGAAGTTGGAATTCCTGCCATCCATGGTTGCAGGCGTTTTGACAGATGATCCCAACCTGCAGCTTGAATCGACAACTCAGTTTCGAAAGTTGCTTTCAATTGAGCGCAGCCCACCAATTGAGGAGGTTATTCAAGCTGGTGTAGTTTCTCGTTTTGTTGAGTTTTTGATGAGAGAAGACTTTCCTCAATTGCAGTTTGAGGCAGCTTGGGCTTTGACAAATATAGCTTCTGGAACATCTGAAAACACTAAAGTGGTGGTTGATCATGGTGCTGTTCCGATTTTTGTCAAACTCCTTGGTTCTCCAAGTGATGATGTCCGGGAACAGGCTGTGTGGGCATTAGGAAATGTTGCTGGGGATTCTCCCAGGTGCCGTGATCTTGTTCTCGGTCATGGGGCCTTGGTTCCTCTGCTGGCACAGTTGAATGAGCAAGCTAAGCTTTCTATGCTTAGAAATGCTACCTGGACGCTTTCAAATTTCTGCAGGGGCAAGCCACAACCTCCTTTTGAACAGGTAAAACCTGCACTCCCTGCTCTCGCCCATCTTATCCACTCAAATGATGAAGAAGTCTTGACTGATGCTTGCTGGGCACTTTCATATCTTTCTGATGGTACAAATGACAAAATTCAAGCTGTAATTGAAGCTGCCATATGTGGTCGGCTTGTTGAGCTTTTGTTGCATTCATCCCCTTCTGTGCTTATTCCTGCTCTTCGTACAATTGGAAATATTGTCACTGGTGATGATATGCAGACTCAGGTTATAATCAACCATCAAGCACTTCCTTGTCTTTTGAATCTATTAACAAACAACTATAAGAAAAGCATAAAGAAGGAAGCCTGTTGGACCATATCAAATATCACAGCTGGGAATAAACAACAGATTCAGGCTGTAATTGAGGCTAATTTAATCGGTCCTCTCGTTGATCTTCTTCAAAATGCTGAGTTTGATATTAAGAAAGAGGCCGCTTGGGCTATCTCTAATGCTACATCTGGTGGATCTCATGATCAAATCAAGTACCTGGTTAGTCAGGGGTGTATTAAGCCCTTGTGTGATCTTCTCATCTGCCCTGATCCTAGAATTGTGACTGTTTGCCTGGAGGGGCTTGAAAACATCTTGAAGGTTGGAGAAGCTGATAAAAATATGGGTAACACGGGGGATGTGAGTCTCTATGCCCAAGTAAGTGATGTGAATCATTATGCCCAACTAATTGATGATGCCGAGGGTTTGGAGAAAATTGAGAATCTACAAAGTCATGATAACACTGAGATTTATGAGAAGGCAGTGAAAATTCTGGAGACATATTGGTTGGAGGAAGAAGATGAGACTATGCCTCCAGGGGACACTTCCCAGTCAGGGTTCAACTTTGATGGCTCTGAGGTTCCTGCTGTGCCTTCTGGGGGATTCAACTTTAACTGA 1626 0.4533 MSYRPAANSRTEVRRSRYKVAVDAEEGRRRREDTMVEIRKIRREESLQKKRREGLQAQQMPSSLHSTAVEKKLEFLPSMVAGVLTDDPNLQLESTTQFRKLLSIERSPPIEEVIQAGVVSRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVVDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALVPLLAQLNEQAKLSMLRNATWTLSNFCRGKPQPPFEQVKPALPALAHLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAAICGRLVELLLHSSPSVLIPALRTIGNIVTGDDMQTQVIINHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKQQIQAVIEANLIGPLVDLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNMGNTGDVSLYAQVSDVNHYAQLIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDETMPPGDTSQSGFNFDGSEVPAVPSGGFNFN 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02829 541 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Accr5g02829 541 Pfam Importin beta binding domain 14 96 IPR002652 GO:0006606|GO:0061608
Accr5g02829 541 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Accr5g02829 541 FunFam Importin subunit alpha 13 52 - -
Accr5g02829 541 SUPERFAMILY ARM repeat 16 510 IPR016024 -
Accr5g02829 541 PANTHER IMPORTIN ALPHA 14 511 - -
Accr5g02829 541 Gene3D - 13 52 IPR036975 GO:0006606
Accr5g02829 541 PIRSF Importin_alpha 5 540 IPR024931 GO:0005737|GO:0006606|GO:0061608
Accr5g02829 541 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 160 IPR000225 GO:0005515
Accr5g02829 541 Pfam Atypical Arm repeat 467 513 IPR032413 -
Accr5g02829 541 Pfam Armadillo/beta-catenin-like repeat 360 399 IPR000225 GO:0005515
Accr5g02829 541 Pfam Armadillo/beta-catenin-like repeat 404 441 IPR000225 GO:0005515
Accr5g02829 541 Pfam Armadillo/beta-catenin-like repeat 107 147 IPR000225 GO:0005515
Accr5g02829 541 Pfam Armadillo/beta-catenin-like repeat 276 314 IPR000225 GO:0005515
Accr5g02829 541 Pfam Armadillo/beta-catenin-like repeat 245 272 IPR000225 GO:0005515
Accr5g02829 541 Pfam Armadillo/beta-catenin-like repeat 149 188 IPR000225 GO:0005515
Accr5g02829 541 Pfam Armadillo/beta-catenin-like repeat 318 358 IPR000225 GO:0005515
Accr5g02829 541 Pfam Armadillo/beta-catenin-like repeat 191 232 IPR000225 GO:0005515
Accr5g02829 541 FunFam Importin subunit alpha 74 506 - -
Accr5g02829 541 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
Accr5g02829 541 Gene3D - 75 506 IPR011989 -
Accr5g02829 541 SMART arm_5 360 400 IPR000225 GO:0005515
Accr5g02829 541 SMART arm_5 106 147 IPR000225 GO:0005515
Accr5g02829 541 SMART arm_5 234 273 IPR000225 GO:0005515
Accr5g02829 541 SMART arm_5 403 443 IPR000225 GO:0005515
Accr5g02829 541 SMART arm_5 149 189 IPR000225 GO:0005515
Accr5g02829 541 SMART arm_5 190 232 IPR000225 GO:0005515
Accr5g02829 541 SMART arm_5 275 315 IPR000225 GO:0005515
Accr5g02829 541 SMART arm_5 317 358 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02829 Accr-Chr5 54036381 54040709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02829 132 392 U-box Gene Family AT3G46510 23.755 1.64e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02829 K15042 - gmx:100789135 978.393