Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02828 ATGGATCCGGAGGGAGTATCCAACGACGGATCTAGCTACTACTCCATCCTGGGGATTCCTAGGGATGCTTCCTTCTCTGATGTCCGCACCGCCTATCGAAATCTCGCTCTGAAGTGGCACCCGGACAGATGGGCCGGAAACATTGCAATCATTGGAGAAGCCAAACGGCGATTCCAGCAAATTCAAGAAGCCTACTCAGTTCTTTCCGATCAGTCTAAAAGGTCAATGTACGACGCCGGATTCTACGATCCTTTAGAAGAAGAAGACGAAGAATTCTGTGATTTCATGAACGAAATGATCTCTATGATGAACAATGTGAAGGACGAGGGGAACAGTTTGGAAGATCTACAAAGGATGTTCGTAGAAATGGTTGGTGGAGATGAAATGAGCTTCGAGTCGAAGGATGATCAGACGAGTGGCAAGAGAGGACGTGTCAGTGCACCAAGAGGCAACGCAGCTAAGCGCAGCAACTCTCGCTTCTAG 483 0.4845 MDPEGVSNDGSSYYSILGIPRDASFSDVRTAYRNLALKWHPDRWAGNIAIIGEAKRRFQQIQEAYSVLSDQSKRSMYDAGFYDPLEEEDEEFCDFMNEMISMMNNVKDEGNSLEDLQRMFVEMVGGDEMSFESKDDQTSGKRGRVSAPRGNAAKRSNSRF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02828 160 CDD DnaJ 13 70 IPR001623 -
Accr5g02828 160 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Accr5g02828 160 Gene3D DnaJ domain 3 102 IPR036869 -
Accr5g02828 160 Pfam DnaJ domain 13 78 IPR001623 -
Accr5g02828 160 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Accr5g02828 160 SUPERFAMILY Chaperone J-domain 8 81 IPR036869 -
Accr5g02828 160 MobiDBLite consensus disorder prediction 129 160 - -
Accr5g02828 160 PANTHER PUTATIVE, EXPRESSED-RELATED 9 138 - -
Accr5g02828 160 SMART dnaj_3 11 73 IPR001623 -
Accr5g02828 160 PRINTS DnaJ domain signature 32 47 IPR001623 -
Accr5g02828 160 PRINTS DnaJ domain signature 14 32 IPR001623 -
Accr5g02828 160 PRINTS DnaJ domain signature 53 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02828 Accr-Chr5 54028963 54030271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02828 13 79 C2H2 Transcription Factor Family AT1G74250 39.706 1.56e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02828 - - gmx:548049 249.21