Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02820 ATGGCTCACACCAGTAACAATGTCGGTGGGGTCGACAACACATTCCGAAGAAAATTTGACCGAGAGGAGTATTTGGAAAGAGCTCGGGAGCGTGAGAGGCAGGAAGAGGAGGGTCGATCTAGACCTAAATCCAAAGGTCCTCTAGTGCAGAGGAAACCCTTGAAACATAGAGATTATGAGGTGGACCTTGAATCCCGCTTGGGGAAGACTCAGGTTGTTACTCCAGTTGCACCTCTTAGCCAGCAGGCTGGATACTACTGCTCGGTTTGTGAATGTGTGGTAAAGGATTCTGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCTCTGGGAATGTCTATGCGAGTAGAACGGGCTTCTCTGTCACAGGTTCAGGAACGATTCGAAGTTCTTAAAAAGCGGAAAGATGTTGGAAGTTTCACAGAGCAAGATCTGGATGACCGGATCTTAAAACAGCAACAAGAAGAGGAAGAAAGAAAGCGACAGCGACGGGAAAGGAAGAAAGAGAAGAAGAGAGAGAAGGAGGTTGAAGAAGCACCTGAAACAGATCCTGATATTTCAGCTATGATGGGGTTCGGTGGCTTTCGGTCATCCAAGAAATGA 612 0.4624 MAHTSNNVGGVDNTFRRKFDREEYLERARERERQEEEGRSRPKSKGPLVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLSQVQERFEVLKKRKDVGSFTEQDLDDRILKQQQEEEERKRQRRERKKEKKREKEVEEAPETDPDISAMMGFGGFRSSKK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02820 203 MobiDBLite consensus disorder prediction 148 184 - -
Accr5g02820 203 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Accr5g02820 203 Coils Coil 153 182 - -
Accr5g02820 203 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 10 203 IPR040107 GO:0000398|GO:0005681
Accr5g02820 203 MobiDBLite consensus disorder prediction 148 203 - -
Accr5g02820 203 FunFam zinc finger matrin-type protein 2-like 79 117 - -
Accr5g02820 203 MobiDBLite consensus disorder prediction 27 44 - -
Accr5g02820 203 Pfam Zinc-finger of C2H2 type 85 109 - -
Accr5g02820 203 Gene3D Classic Zinc Finger 79 117 - -
Accr5g02820 203 MobiDBLite consensus disorder prediction 27 55 - -
Accr5g02820 203 SUPERFAMILY beta-beta-alpha zinc fingers 80 121 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02820 4 147 C2H2 Transcription Factor Family AT3G05760 80.556 1.61e-82 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr5g02820 zf-C2H2_jaz 1.9e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02820 K12848 - gmx:100527057 298.516