Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02810 ATGCGAGGCTACACAAGAAGGAGTTCCAAGGCTAACATCATGGCCCCTCAAATCGAACCCGCTGGTGCTCCAAAACAGGGCCCCTCTATTGATTCCGACACTTTTTATCACAAACTCAAGCAATTGTGGGACTCCTACGGACTTGGTCTAATTATAAATGCCCGAGAAACTTTGCTGGATTTGTTCCTCTTTTACTCGGAGGTGACCAGAAGAGGAGGTTATCATCAGGTCAGTAGAGACAAGAAATGGGATGAACTTGTTTCTGCCTTAAAGCTGGAAGGCAGTCAGGCAAACTTACCTGTTCAGCTTGAAAAGTGTTACGCTCTGCTTCTTTACCAGTTTGAGCAACTCTACCACTACAGGGATCCAGCACATAAAGCTGCGACTAACCCCACCTTAGGTCTGCTCACAAATTCCATAAGCTCAGAGAGGAAGCGTAAATATGAGGTTAGATTGTTTGAATTAGTGGACGATGAAGGTGGCGAGGTGGAGATAGGCACGTGCAAGGAAACGACAGGGAGCGAGCTTGAAGAACAGAAAATGGTGGTATACACATCCCCAGATGACAAGAAAGTGAAGAAACGCCGAGGTGCTCCACGGGGACATAAAACTGCATATCAGATATTCATCAAGCAGGAATGCGCTCGGCTGAGAAGTTGTAAGGAAGCATCTGATCGCTCAAATATTTTGTACATGGCCATTGATGCATGGAGGAATATGACTGAGACTGAAAAACAGCCTTTTGTGGAGGAAAGCAGGAAGGAAAGGGAAAGGCTGATGGAAGCAAGGAAAGCTCAAGATCAGAATGTTGAGGCAGAAACTGATGCAGGGAACTGCAGTGATGGCTTAGAGCTTATAATGAGTGAAGAATCAGAATCCGAAGCGCCATTAACTGTTGACATGGGATTCATACCGAGTAGAGCATGA 927 0.4585 MRGYTRRSSKANIMAPQIEPAGAPKQGPSIDSDTFYHKLKQLWDSYGLGLIINARETLLDLFLFYSEVTRRGGYHQVSRDKKWDELVSALKLEGSQANLPVQLEKCYALLLYQFEQLYHYRDPAHKAATNPTLGLLTNSISSERKRKYEVRLFELVDDEGGEVEIGTCKETTGSELEEQKMVVYTSPDDKKVKKRRGAPRGHKTAYQIFIKQECARLRSCKEASDRSNILYMAIDAWRNMTETEKQPFVEESRKERERLMEARKAQDQNVEAETDAGNCSDGLELIMSEESESEAPLTVDMGFIPSRA 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02810 308 CDD ARID 31 115 - -
Accr5g02810 308 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 18 269 - -
Accr5g02810 308 SMART ARID_2 26 115 - -
Accr5g02810 308 Pfam HMG-box domain 199 259 IPR009071 -
Accr5g02810 308 SUPERFAMILY ARID-like 30 123 IPR036431 GO:0003677
Accr5g02810 308 SMART bright_3 30 120 IPR001606 GO:0003677
Accr5g02810 308 Gene3D High mobility group box domain 185 279 IPR036910 -
Accr5g02810 308 MobiDBLite consensus disorder prediction 289 308 - -
Accr5g02810 308 SUPERFAMILY HMG-box 181 262 IPR036910 -
Accr5g02810 308 Coils Coil 249 269 - -
Accr5g02810 308 Gene3D - 15 131 IPR036431 GO:0003677
Accr5g02810 308 Pfam ARID/BRIGHT DNA binding domain 32 115 IPR001606 GO:0003677
Accr5g02810 308 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 199 267 IPR009071 -
Accr5g02810 308 ProSiteProfiles ARID domain profile. 29 119 IPR001606 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02810 59 284 ARID Transcription Factor Family AT1G55650 25.794 2.11e-18 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Accr5g02810 ARID 1.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02810 - - pcin:129307373 441.81