Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02809 ATGGCATCTTTGGAATCAATTGTGGATCCAATAAGTTCAGAGACGTACCAAGAAGGCAGTCAGAGAAAGCGAAGGAAAATCGGGCACGATGCCGGCAACGATCAGGATTCGCTCCCTGCGATTCCGTGGAGATCCGAGACAGAGCAGCGGACCTATTCCTCCAAACTCGTCGAAGCTCTCCGCCGCGTTCTCCGCCAGGGTTCTTCTTCCACGGCCAAGCCTCGCCTCGGGCGCGATGTTCGTGAGGTAGCCGACAGGGTTCTCGCCGTGACAGCGAGAGGCAGGACTCGGTGGAGTCGGGCGATATTGGCCTCTCCGCTCAGTCGGAGAAAGTTCCAGAGGCAGCATAAGAAGGTCAAGAAGGCGGCGAACGGATTGAAGAAACCAGAGGTTAGAAGAGAGAGGAGGAGGCTGCCGGCCGTGCAGAGGAAAGCGCGAGTTCTCGGCCGGTTAGTTCCCGGTTGCCGGAAGGTTTCGTTTCCGAGTCTCCTCGAAGAAACCACTGATTATATTTCGGCCTTGGAAATGCAAGTTCGAGCCATGACAGCACTCACAGAGCTGCTTGGAGGTGGCGCGCCGGCCAATCGGCTCGGGTAG 597 0.5729 MASLESIVDPISSETYQEGSQRKRRKIGHDAGNDQDSLPAIPWRSETEQRTYSSKLVEALRRVLRQGSSSTAKPRLGRDVREVADRVLAVTARGRTRWSRAILASPLSRRKFQRQHKKVKKAANGLKKPEVRRERRRLPAVQRKARVLGRLVPGCRKVSFPSLLEETTDYISALEMQVRAMTALTELLGGGAPANRLG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02809 198 MobiDBLite consensus disorder prediction 1 17 - -
Accr5g02809 198 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 188 IPR044660 GO:0006355
Accr5g02809 198 CDD bHLH_AtIBH1_like 132 185 IPR044549 GO:0006355
Accr5g02809 198 Gene3D - 115 189 IPR036638 GO:0046983
Accr5g02809 198 MobiDBLite consensus disorder prediction 18 32 - -
Accr5g02809 198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Accr5g02809 198 MobiDBLite consensus disorder prediction 1 46 - -
Accr5g02809 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 191 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02809 Accr-Chr5 53882867 53883463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02809 4 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.833 7.46e-40 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02809 - - pcin:129310330 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03438 2 69989617 69990225 Accr5g02809 5 53882867 53883463 CCT
Accr5g02809 5 53882867 53883463 Accr5g02809 5 53882867 53883463 ECH
Accr2g03438 2 69989617 69990225 Accr5g02809 5 53882867 53883463 ECH