Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02755 ATGGGGAGGCACTCTTGCTGCTATAAGCAGAAGCTTCGCAAGGGTCTATGGTCCCCTGAGGAGGATGAAAAACTTCTGACACATGTTACCAAGTATGGCCATGGCTGCTGGAGCTCTGTTCCTAAGCAAGCCGGCCTGCAGAGGTGTGGTAAGAGCTGTCGGCTGAGGTGGATCAATTACCTGCGGCCTGATTTGAAGAGAGGAACATTCTCCCAGGAAGAAGAAGACCTTATCATTGAACTTCACGCTGTGTTGGGAAATAGATGGTCTCAAATTGCGGCGCAATTGCCTGGAAGAACTGACAATGAAATAAAGAATCTGTGGAATTCTTGCTTGAAGAAGAAACTGAAGCTGAGAGGCATCGACCCTGTTACCCACAAACCACTCTCTGAGGTTCAGAACGGAGACGACAAAGACAAAGAGCTCAATGAATTGAAACTCCTCAAATCAGAAAGCCGCACCTCAGATGCCACAAAAGCCTATACACCCATTATGGAAGGATGTTCCAGTTTCAAGTACAACAACGGCACAAGTAACACCAATTTGCCAACCAACTGTAGCAGCAAAGATTTGCTCCCAGATGGGTTTACAACGAGCTACACCACTTCAGGGCTGATGAGTAATTTCCCACTTCAGATGAATTATGCATCCACTTCTGATACCTTCTCTTCCAATTCAAACCCTTCCCAATGGTTCACCAAAACAGGAAGACCAATATTCAATATGAACTCAGAATTTGCTTCCCATTCCATTTCTACTGTTCTTGCACCTGCACAAACTTCATATCTTGGTGTTCCCTGCGACGATATTTGTGCGGCTTCTTATGCTGAGAATGCATCTCAATCTCATTTCTGGGGATTGACGGATTCGGCAAAAGAGACCCAAATTCAAGTGCTGCAAAACCAAACAGAGGAAGCCAAGTGGGGTGATTACGTTCAAAACCCAATCTTAATGCTGCCCGTGACTCATCTGTTATCTGATAATTTAGGGGTCATGTTGCCTCATAACAAGCAGCAAGAAGAACCATCACAGACTTGTAATATGTTTTCCAAGGACATCCAGAAGCTCACGGCTTCGTTTGGACATATATAG 1092 0.4505 MGRHSCCYKQKLRKGLWSPEEDEKLLTHVTKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLKLRGIDPVTHKPLSEVQNGDDKDKELNELKLLKSESRTSDATKAYTPIMEGCSSFKYNNGTSNTNLPTNCSSKDLLPDGFTTSYTTSGLMSNFPLQMNYASTSDTFSSNSNPSQWFTKTGRPIFNMNSEFASHSISTVLAPAQTSYLGVPCDDICAASYAENASQSHFWGLTDSAKETQIQVLQNQTEEAKWGDYVQNPILMLPVTHLLSDNLGVMLPHNKQQEEPSQTCNMFSKDIQKLTASFGHI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02755 363 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr5g02755 363 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Accr5g02755 363 Gene3D - 11 67 - -
Accr5g02755 363 PANTHER MYB DOMAIN PROTEIN 55 1 278 - -
Accr5g02755 363 FunFam MYB transcription factor 68 140 - -
Accr5g02755 363 CDD SANT 17 61 IPR001005 -
Accr5g02755 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr5g02755 363 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr5g02755 363 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr5g02755 363 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr5g02755 363 SMART sant 13 63 IPR001005 -
Accr5g02755 363 SMART sant 66 114 IPR001005 -
Accr5g02755 363 FunFam Myb transcription factor 11 67 - -
Accr5g02755 363 CDD SANT 69 109 IPR001005 -
Accr5g02755 363 Gene3D - 69 146 - -
Accr5g02755 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02755 Accr-Chr5 53473037 53474316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02755 1 140 MYB Transcription Factor Family AT4G01680 90.071 1.06e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g02755 Myb_DNA-binding 9.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02755 K09422 - gmx:100782199 429.098