Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02750 ATGGATCACAGCCCTCATCGTCCCTCTCGTGAATTGACCTTCTTCAGCTCCGACGACTTTCTCCCCCATAATTCAGATCCAACAGCCGGCCGCCAGCATCCTCCCCTCAAGGAAATGGATTTCTTCTCCCGCTCAGTTGACAAAAACTGTGATTCTAGCCCGCCTCATCATCAGGATCCAGATCATGACGACGACCGCCAAGACGGAAATGGATCGGTTCCTCCCACTGATCGGCCTGTAAACACCGGCCTAAATCTAACGCGTGTAGGTCCTGGAACGTCAGTGGAGGCTCATGAAAATCCTAACACCGAGCTCATGAGCACAATCCGAGGTGAATTAAGGAGGCTGCATGTAGAGAACAGGAAGTTGAGAACTATGCTCGACCAGATCACCAAAAGCTATAGCCAACTACAAGCCCAGCAGTTTATCGCTCTGCAAAATAAAAACCCTATGAAGGTTGAAGCAAATGGAATAGGGTTGGGTAAACAGTCGAGGGACCCACAGCCATCTGCCAATGATGCATCGATCTCCGATGATAAGACTCAGTCAGTTTCGGCGCCCTCAAACAATGCGGAGAGTTGGGAGTCATGCAAGAGCACAAGGTTACAAGAATCCAAGAGATCAGACGAACAAGTTTCGGATCAGGCCCCCTTCAGGAAAGCCAGGGTTTCCGTACGCGCAAGATCAGAAGCTCCTCTGATAAGCGATGGATGTCAATGGAGAAAATATGGACAGAAAATGGCAAAGGGCAATCCCTGCCCTCGTGCTTATTATCGTTGCACTATGGCCGTAGGATGCCCAGTTCGTAAGCAGGTGCAACGGTGTGCGGAGGACAAGACAGTGCTGATAACTACCTACGAAGGAAATCACAACCACCCTCTCCCTCCGGCGGCCACCGCCATGGCTAATACAACATCGGCGGCGGCCGCAATGCTCCTTTCCGGTTCAACATCAAGTACGAGCAAGGAAGGCTTAACACATTGCGCGGGATACATGGGTTCGATGGCCTACCCGTACGCGTCATTGGCCACATTATCAGCGTCTGCACCATTTCCAACTATCACCTTGGACTTGACCCAAGTCCCAAACGGCATGCAGCTGCAACGAGCACATCCCTCATCATCAATGCCAGTAATGTTTCATGGGATCCCTCAGGGACAGCTAACAGGACATCCCATGATGTTCCCACAGAACTTGCTTCAACTAGGGCAAAGGCTGCCTTCCAATTCTTCGGCTATGGTTGAGACGGTGAGTGCAGCCATTGCTTCTGATCCCAATTTGACTGCAGCATTGGCTGCTGCAATCTCATCCATCATAGGGGCATCGGGCGGTGGCGGCGGAGCAGCAGGTAATAATACGGTTACGGCACCTACCGGAGCTGCTATAAATATTCCAAATAGTGCCTTTAACCCCAATCTTCCTGTGCTCCCTCTCTCCCCGCAACTTCCTCGTTCTCGCACTACGCTGTCCACCAACTAG 1479 0.5152 MDHSPHRPSRELTFFSSDDFLPHNSDPTAGRQHPPLKEMDFFSRSVDKNCDSSPPHHQDPDHDDDRQDGNGSVPPTDRPVNTGLNLTRVGPGTSVEAHENPNTELMSTIRGELRRLHVENRKLRTMLDQITKSYSQLQAQQFIALQNKNPMKVEANGIGLGKQSRDPQPSANDASISDDKTQSVSAPSNNAESWESCKSTRLQESKRSDEQVSDQAPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSSTSKEGLTHCAGYMGSMAYPYASLATLSASAPFPTITLDLTQVPNGMQLQRAHPSSSMPVMFHGIPQGQLTGHPMMFPQNLLQLGQRLPSNSSAMVETVSAAIASDPNLTAALAAAISSIIGASGGGGGAAGNNTVTAPTGAAINIPNSAFNPNLPVLPLSPQLPRSRTTLSTN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02750 492 Gene3D WRKY domain 219 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g02750 492 Pfam WRKY DNA -binding domain 236 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g02750 492 MobiDBLite consensus disorder prediction 199 219 - -
Accr5g02750 492 Coils Coil 120 140 - -
Accr5g02750 492 MobiDBLite consensus disorder prediction 163 198 - -
Accr5g02750 492 MobiDBLite consensus disorder prediction 1 108 - -
Accr5g02750 492 SUPERFAMILY WRKY DNA-binding domain 227 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g02750 492 MobiDBLite consensus disorder prediction 157 219 - -
Accr5g02750 492 MobiDBLite consensus disorder prediction 37 71 - -
Accr5g02750 492 MobiDBLite consensus disorder prediction 74 89 - -
Accr5g02750 492 SMART WRKY_cls 234 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g02750 492 ProSiteProfiles WRKY domain profile. 229 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g02750 492 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 99 447 IPR044810 GO:0003700
Accr5g02750 492 FunFam probable WRKY transcription factor 31 219 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02750 Accr-Chr5 53427736 53430189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02750 10 492 WRKY Transcription Factor Family AT4G01720 42.218 1.41e-81 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr5g02750 WRKY 5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02750 - - hbr:110653384 381.333