Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02744 ATGGATGATTGCGGTAAGGTTTTGAGGAGATGGAGTTGGGAGGAGAACAAGTTGTTCGAGGTGGCGCTGGCGGTGGTAGACGAGCAATACCCAGATCGATGGGAGGTGATTGCAGCCATGGTCGGAGGAAACAAGAAAGCAGGGGACGTTCAAGAGCACTATGTGACCCTTTTGGAGGATTTGCATGTCATAGAGTCAGGAAAGCTCGACCATGACCTTCCACAGACTCAACCCTGTCTTCTGCTCCACTTTCCCCACTCGTGA 264 0.5189 MDDCGKVLRRWSWEENKLFEVALAVVDEQYPDRWEVIAAMVGGNKKAGDVQEHYVTLLEDLHVIESGKLDHDLPQTQPCLLLHFPHS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02744 87 Gene3D - 9 62 - -
Accr5g02744 87 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Accr5g02744 87 FunFam Transcription factor SRM1 6 71 - -
Accr5g02744 87 CDD SANT 10 58 IPR001005 -
Accr5g02744 87 SMART sant 7 60 IPR001005 -
Accr5g02744 87 Pfam Myb-like DNA-binding domain 10 58 IPR001005 -
Accr5g02744 87 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 10 69 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02744 Accr-Chr5 53367071 53367334 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr5g02744 Myb_DNA-binding 3.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02744 - - pcin:129304790 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02744 5 53367071 53367334 Accr5g02744 5 53367071 53367334 ECH