Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02743 ATGATGAACAAAAAAGTGGTTGTGTCCGCTGTTTCTATCATCCTCGTGGTGGGTGTGACCCTGGGTGTCATCGGCATCGTCAGCTACAAGAACAAGGGCAGCAGCAACAATGAGCAGCAAGAGACAAACACCCAGAACAAGGCCGTTGCCTACCTGTGCCAAAACTCCGACGACCCCAAGCTCTGCCACGACACGCTCGACTCTGTAAACAGCACCGACCCTAAGGAATATATAAAGGCAGTGGTGGAGTCCGCCATGAAGACCGTTATATCGTCTTTTAACTTGACGGACAAGATTGAAGTAGAGCACAGGAACGGGTCCACAAGAGGCATAAAGATGGCCGTCGAGGATTGCAAGGACTTGCTGCAATCTGCGATCGCGGAACTGCAGGCATCGGGTGTGCTGGTTCAAGAAAACAATGCCCGAAGCGTGACCGACCGGGAAGATGACCTCAAGAATTGGCTGAGCGCCGTCATAGCGTACCAGCAATCTTGTCTGGATGGGTTTGAGGCTGAGAATGAGGGCGAGAAGGCGGTTCAGCAGCAATTGCAAACGGGCGGTCTGGACAACGTGGAGAAGCTCACAGGGTTGGCGCTAGACGTTGTGTCCGGCATTTCCGAGCTGCTTTCCGTCTTCGACTTGGACTTGGACGTCAAGCCTGCTTCCCGTCGCCTTCTGAATAAGGTGGATACCGAAGGCTATCCCACTTGGCTCTCAAGCCGCGACCGCAAGCTTATCGAGCAGCCCAACACTGGACATCCCATCAATGGGCCAAACGCCGTAGTTGCCCAGGACGGAAGTGGCCAGTTCAAGACCATTCAAGAAGCCGTCAACTCGTACCCCAAGGGATTCGAAGGCAGATTCACCATCTACGTCAAGGCTGGTATCTACAATGAATATGTCCACATCACCAAGAAGCAGCCCAACATCTTCATGTACGGCGATGGCCCTACCAAGACCATTGTCACCGGCAACAGGAGCTACACCTCCGGATGGAAAACAATCCAAACTGCCACCTTCACTACCGTGGCTGATGGTTTCACTGCCAAGTCGATGGCCATCGAGAACACCGCCGGGCCTGAAGGACACCAAGCAGTTGCACTGAGGGTGATGGGCGATCGCTCCTCTTTCTTCGATTGTGCCATCCGTGGCTACCAAGACACCCTGTACGCACACGCCAAACGTCAATTCTACCGCAACTGTGAGATCTCCGGCACAGTGGACTTCATCTTCGGATACGGAAGCACCTTGGTCCAGAACTCCAGGATCTTGATCAGGAAGCCGATGGACAACCAGCAAAACATCGTCGTCGCCGATGGCACTGCCAACAAGCAAATGCGCACCGGAATTGTCCTCCAGAACTGCCAGATCATGCCCGACGCCAGCCTCAACGCCGACAGGCTGACCATCAAGTCCTACCTGGCCAGGCCATGGAAGGCATTCTCCAGGGCCATCTTCATGGAAAATGAAATCGGTGATCTCATCCAGGCCGATGGTTATCTTCCATGGATGGGCAGCATGTACCTTGACACCTGCTACTTCGCCGAGTATGCAAACTCCGGTCCCGGCGCCGCCACAAACAACAGGGTCAAGTGGGGCCACGGCGTCCTCACCAAGGACGAGGCCACTCAATACACCGCCGAATCTTGGCTCCAGGCCAGCACATGGCTCCCCGCCACCGGCGTTGCCTTTGACAGCGTTTTCACCAAAGCTTAA 1716 0.5472 MMNKKVVVSAVSIILVVGVTLGVIGIVSYKNKGSSNNEQQETNTQNKAVAYLCQNSDDPKLCHDTLDSVNSTDPKEYIKAVVESAMKTVISSFNLTDKIEVEHRNGSTRGIKMAVEDCKDLLQSAIAELQASGVLVQENNARSVTDREDDLKNWLSAVIAYQQSCLDGFEAENEGEKAVQQQLQTGGLDNVEKLTGLALDVVSGISELLSVFDLDLDVKPASRRLLNKVDTEGYPTWLSSRDRKLIEQPNTGHPINGPNAVVAQDGSGQFKTIQEAVNSYPKGFEGRFTIYVKAGIYNEYVHITKKQPNIFMYGDGPTKTIVTGNRSYTSGWKTIQTATFTTVADGFTAKSMAIENTAGPEGHQAVALRVMGDRSSFFDCAIRGYQDTLYAHAKRQFYRNCEISGTVDFIFGYGSTLVQNSRILIRKPMDNQQNIVVADGTANKQMRTGIVLQNCQIMPDASLNADRLTIKSYLARPWKAFSRAIFMENEIGDLIQADGYLPWMGSMYLDTCYFAEYANSGPGAATNNRVKWGHGVLTKDEATQYTAESWLQASTWLPATGVAFDSVFTKA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02743 571 FunFam Pectinesterase 255 568 - -
Accr5g02743 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 203 IPR035513 -
Accr5g02743 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 205 IPR035513 -
Accr5g02743 571 SMART PMEI_2 44 201 IPR006501 GO:0004857
Accr5g02743 571 FunFam Pectinesterase 45 206 - -
Accr5g02743 571 CDD PMEI-like_3 52 206 - -
Accr5g02743 571 Gene3D - 256 568 IPR012334 -
Accr5g02743 571 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Accr5g02743 571 Pfam Pectinesterase 259 553 IPR000070 GO:0030599|GO:0042545
Accr5g02743 571 SUPERFAMILY Pectin lyase-like 257 564 IPR011050 -
Accr5g02743 571 Pfam Plant invertase/pectin methylesterase inhibitor 49 200 IPR006501 GO:0004857
Accr5g02743 571 PANTHER PECTINESTERASE 15 558 - -
Accr5g02743 571 NCBIfam pectinesterase inhibitor domain 32 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02743 Accr-Chr5 53362962 53364762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02743 5 557 Carbohydrate Esterase AT3G62170 41.308 2.01e-139 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02743 K01051 - gmx:100808559 724.546