Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02742 ATGGGTGGAAAAGTTCTCATCTCCGCAGTTTCCCTCATCCTCGTGGTCGGGGTAGCCATCGGCACTGTGATAGTGGTTCACAAGCAGACCAATAATGGCGACTCCTCCGGTAAAATCTCTTCCCATCAGAATACGGTGGTGGCACAGATGTGTCAGAACACTGACGACCCAAATTTCTGCCAACAAACTCTGAGCCACGTCAATGACTCTGACCCAAAGGCATTCCTATCAGCCGTAGTGGAAGCAACCACCAACAGCGTCATCAAGGGCTTGAACATGAGCGACAAGCTCATCGTGGATCACAGCAACGGCGAGAAAGGTGTCAAGATGGCCCTTGGTGACTGCAAGGACTTGCTCCAATTCGCCATGGACAGTCTTCAAATGTCCACTGACTTGTTGCGCAACGACATCAAAACCGTGACCAACCAAACCCCTGACTTCAGGAACTGGCTGGCCGCCGTCATCTCCTACCAACAGGCCTGCATGGACGGCTTTGACAACAACAACGACGGCGAGAAACAGGTCAAGTCACAGTTGCAAGAGCAAGCATTAGACGGCATCGGCAAGATCACCGGTATCGCTCTCGACATTGTGTCTAATCTCTCCAATATCCTTGGAAAGTTTGGGCTGCAGTTGAACTTGAAACCTGCTTCCCGCCGCCTTATGGAGGTGGACAGCGAAGGTTATCCGACGTGGTTCTCGGCATCTGACCGCAAGCTGTTGCAGAACATGAAGAGGGGACATCATTTGAAACCCAATGTGGTGGTGGCTAAGGATGGCAGTGGAAACTTCAAGACCGTCGCAGAGGCCATTGCCTCCTATCCCAAAAATGGTCTCGGCCCCAACGGCAGATACGTCATCTTCGTCAAGGCTGGCGTGTACCAAGAGTACATCATCGTTCCCAAAACTGCAGTGAACATCCTTATGTACGGTGAGGGCCCCGGTAAAACCGTCATCACTGGAAACAAAAACTTTGTTGATGGGGTCAAGACCATGCAAACAGCTACCTTCGCCAACACTGCTAACGGGTTCATCGCCAAGAAAATGTCATTTGTGAACAGCGCGGGAGCTGAAAAGCACCAAGCTGTGGCCCTGAGGAACCAGGGAGACATGTCAGCTTTCTTCAATTGCGCCATCCTGGGTAACCAAGACACCTTGTACGCTCAGACCAACCGTCAGTTCTACAAGAACTGCGACATCTCTGGTACGATTGACTTCATCTTTGGTGTATCACCCACACTGATCCAGAGCTCTAGAATCATCCTGAGGAAGCCATTGGACAACCAATTCAACACAGTGACAGCAGACGGCACACCCCAGAAGAACATGCCCACCGGAATTGTGATCCAAAACTGCGATATCGTGCCGGAGCCAGCTCTGTTCCCCGTCAGGTTCCAATTGAAGTCATACTTGGGAAGGCCATGGAAGGCTTACTCAAAGACTGTGATCATGGAATCCAGAATCGGTGATGTTATTCATCCCGATGGATGGATTCCTTGGGAAGGAAACTTGTACCTCGACACCTTGTACTATGCTGAGCACAACAACGTAGGACCCGGTGCTAATGTGCAGGCTAGGATCAAGTGGCCTGGTTACAAGGGCCTGATCAGCAAGGCCGAAGCTCAGCAGTTCACCGCCTCCCAATTCCTCCGAGGTGGACCCGAATCGAACTCTGCTGTTTGGCTCAAGGCTCTCCACGTTCCTTATGACATTGGCTTCACCAAGGCTTGA 1731 0.5142 MGGKVLISAVSLILVVGVAIGTVIVVHKQTNNGDSSGKISSHQNTVVAQMCQNTDDPNFCQQTLSHVNDSDPKAFLSAVVEATTNSVIKGLNMSDKLIVDHSNGEKGVKMALGDCKDLLQFAMDSLQMSTDLLRNDIKTVTNQTPDFRNWLAAVISYQQACMDGFDNNNDGEKQVKSQLQEQALDGIGKITGIALDIVSNLSNILGKFGLQLNLKPASRRLMEVDSEGYPTWFSASDRKLLQNMKRGHHLKPNVVVAKDGSGNFKTVAEAIASYPKNGLGPNGRYVIFVKAGVYQEYIIVPKTAVNILMYGEGPGKTVITGNKNFVDGVKTMQTATFANTANGFIAKKMSFVNSAGAEKHQAVALRNQGDMSAFFNCAILGNQDTLYAQTNRQFYKNCDISGTIDFIFGVSPTLIQSSRIILRKPLDNQFNTVTADGTPQKNMPTGIVIQNCDIVPEPALFPVRFQLKSYLGRPWKAYSKTVIMESRIGDVIHPDGWIPWEGNLYLDTLYYAEHNNVGPGANVQARIKWPGYKGLISKAEAQQFTASQFLRGGPESNSAVWLKALHVPYDIGFTKA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02742 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 202 IPR035513 -
Accr5g02742 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 203 IPR035513 -
Accr5g02742 576 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Accr5g02742 576 FunFam Pectinesterase 247 573 - -
Accr5g02742 576 Pfam Pectinesterase 253 552 IPR000070 GO:0030599|GO:0042545
Accr5g02742 576 SMART PMEI_2 42 197 IPR006501 GO:0004857
Accr5g02742 576 CDD PMEI-like_3 50 203 - -
Accr5g02742 576 PANTHER PECTINESTERASE 18 563 - -
Accr5g02742 576 SUPERFAMILY Pectin lyase-like 250 554 IPR011050 -
Accr5g02742 576 NCBIfam pectinesterase inhibitor domain 40 201 IPR006501 GO:0004857
Accr5g02742 576 Gene3D - 247 573 IPR012334 -
Accr5g02742 576 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Accr5g02742 576 Pfam Plant invertase/pectin methylesterase inhibitor 46 197 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02742 Accr-Chr5 53356804 53358805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02742 4 573 Carbohydrate Esterase AT3G05610 37.782 5.03e-130 394