Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02741 ATGAAGGGGAAAATAATTGTATCTGCAGTTTCCCTCATCCTTGTGGTGGGGGTGGTGATCGGCGCCGTTGTGGTGTCTAACAACAAGAACAAAGACCCTCAGATCACTGAGCGCCAGAATGCGGTGAAGGCAATGTGCCAGAACACGGAGGACCAAAAGCTTTGCCACGACACTCTGGGCAACGTGCGGAACAGCTCAGACCCAAAAGCATTCTTAGCCGCCGCCGTGGAGGCCTCCGCCAACAACGTCATCAAGGCCCTGAACATGAGCAATAAGCTCAGCGTCGAACAGGGCAACAGCACCCAAGGCATAGTCAAGATGGCCCTCGATGACTGCAAGGACTTTCTCGAATCCGCCATGGACAGCCTCCAGGCTTCCATTGACTTCCTCGGTAACAACACCATCCAAACCCTGATCGATCAATCCCCTGACTTCAAGAATTGGCTCGCCTCCGTCGTCTCCTACCAGCAGGCTTGCATGGATGGGTACGACGACAAGGCGGACGGTGCCCCACAGGTCAGGACTCAGCTTCAGGAGAATGGTTTGGACGACATGGGGAAGATCACAGGCATAGCCCTTGATATGATGGCTGATTTAGAAAGCATCTTGAATCAGTTTGGTCTGAAGATTAAAATGAACCCTTCTGCTCGTCGTCTTCTTGAGGTGGACGGCGAAGGATATCCCACTTGGTTCTCAGCCTCTGACCGCAAGCTGATGGCCCGCATGCGGAGGGGAAGGGGACATCATATCAGGCCCAATGTTGTGGTTGCCCAAGATGGCAGTGGCCAGTTCAAGACCATCATGGATGCCATTAACTCTTATCCTAAGGGTTTCCAAGGAAGATATGCCATCTTCGTTAAGGCTGGTACATACCGTGAGTACGTCGTCATTCCCAAGACAGCCGTCAATATCCTCTTGTACGGTCAGGGCACTGATAAAACAATCGTCACCGGTAGCAGAAACAATGTTGATGGTTACACCACTTCCGACACTGCTACTTTCGTGAATATGGCAAACGGGTTCATCGCCAAGTACATGACATTTGTGAACACCGCTGGTCCTGAAAAGCACCAAGCAGTGGCGTTCAGGAACCAGGGAGATATGTCGGCCTGTTTCGATTGTTCTTTTGTGGGATACCAAGACACGTTGTACGCTCAAACCAACCGTCAACTCTACAGGAACTGCGACATCTCCGGCACCGTTGACTTCATATTCGGAGTGTCCACCACGTTGATCCAGAGCAGTCGAATCATCGTGAGGAAGCCCATGGACAACCAGTTCAACACAGTGACGGCAGACGGCAGAATCCAGAAGAACCTGCCCACAGGAACAGTGATCCAGAACTGCGACATAGTTCCAGAGAATGCTCTGTTCCCCGTGAGGTTCAAGATAAGATCATACCTGGGAAGGCCATGGAAGCAGTACGCTAGAACGGTGGTGATGGAATCAAGAATAGGTGACTTTATTCAGCCAGAAGGCTGGACTCCATGGGCAGGAAACGCCTACCTCAACACATTGTACTACGCAGAGTACAACAACGAAGGACCTGGTGCTAATGTGGCCAGGAGGGTTAGGTGGCCTGGCTACAAGGGCCTCATCAGTAGGAATGAAGCCGCTCAGTTCACCGCCGGCATATTCCTCAAGGGCGGGCCCACTTCCCGAGCTGAGGACTGGATGAAGCCCCTTCATGTTCCTTTTGACATCGGCCTCACCAAGGCCTAA 1722 0.5215 MKGKIIVSAVSLILVVGVVIGAVVVSNNKNKDPQITERQNAVKAMCQNTEDQKLCHDTLGNVRNSSDPKAFLAAAVEASANNVIKALNMSNKLSVEQGNSTQGIVKMALDDCKDFLESAMDSLQASIDFLGNNTIQTLIDQSPDFKNWLASVVSYQQACMDGYDDKADGAPQVRTQLQENGLDDMGKITGIALDMMADLESILNQFGLKIKMNPSARRLLEVDGEGYPTWFSASDRKLMARMRRGRGHHIRPNVVVAQDGSGQFKTIMDAINSYPKGFQGRYAIFVKAGTYREYVVIPKTAVNILLYGQGTDKTIVTGSRNNVDGYTTSDTATFVNMANGFIAKYMTFVNTAGPEKHQAVAFRNQGDMSACFDCSFVGYQDTLYAQTNRQLYRNCDISGTVDFIFGVSTTLIQSSRIIVRKPMDNQFNTVTADGRIQKNLPTGTVIQNCDIVPENALFPVRFKIRSYLGRPWKQYARTVVMESRIGDFIQPEGWTPWAGNAYLNTLYYAEYNNEGPGANVARRVRWPGYKGLISRNEAAQFTAGIFLKGGPTSRAEDWMKPLHVPFDIGLTKA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02741 573 SUPERFAMILY Pectin lyase-like 250 567 IPR011050 -
Accr5g02741 573 PANTHER PECTINESTERASE 14 560 - -
Accr5g02741 573 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Accr5g02741 573 Gene3D - 247 570 IPR012334 -
Accr5g02741 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 196 IPR035513 -
Accr5g02741 573 CDD PMEI-like_3 44 197 - -
Accr5g02741 573 FunFam Pectinesterase 247 570 - -
Accr5g02741 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Accr5g02741 573 NCBIfam pectinesterase inhibitor domain 16 168 IPR006501 GO:0004857
Accr5g02741 573 SMART PMEI_2 37 195 IPR006501 GO:0004857
Accr5g02741 573 Pfam Pectinesterase 253 549 IPR000070 GO:0030599|GO:0042545
Accr5g02741 573 Pfam Plant invertase/pectin methylesterase inhibitor 41 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02741 Accr-Chr5 53347134 53349148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02741 1 570 Carbohydrate Esterase AT2G47030 41.098 9.56e-137 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02741 K01051 - gmx:100775246 721.079