Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02732 ATGGTGGCCGAAGCAGACCTTATGCGTCCACAGAGCACCCCTGCGTTTGATGTTCAGTGTTTTCCTAACGGAACAAATATATGTGAGATCGAAGATGCCGTTTCCACCAGGCCTCCGAGTTTTGATCGAGTTCGTGCTTCTCCATTAGCGTCTGCCCTGTTATTCAGTTCACAAGAAGATATTAAAGCTGCAGACGGAATATCAAATGCTGCTCGTGATTCTGCTGTTATTCAATTTGTTCCCAGCATCCGTTCTGGTAGTTTTGCTAACATTGGCCCCCGGAGATATATGGAAGATGAACATATAAGGATAGATGATTTGTCTTCTCACATGGGATCACTATACACATTTCCTGAACCAAGTGCCTTCTATGGGGTATTTGATGGTCACGGAGGACCTGAAGCTGCAGCCTATATCCAGAAAAATGTAATGAGATTCTTCTTTGAAGATGTTAGCTTCCCTCAGACATCTGAAGTTGATAATGTTTTTTTACAAGAGGCAGAGAACTCTCTCAGAAAATCATTTCTTTTGGCTGACGTAGCTTTGGCTGATGATTGCAGTGTGAGCAACTCATCAGGGACCACGGCTCTTACTGCCTTGATATTCGGAAGGCTTCTAATGGTGGCTAATGCTGGCGATTGCCGAGCAGTTCTCTGTCGTAAAGGAGAGGCAATTGACATGTCTCAAGATCACAGGCCTATATATCCTTTGGAGCAGAGGCGAGTTGAGGAACTAGGCGGTCATGTAGATGATGGTTATCTTAATGGGGTTTTGTCAGTTTCTCGAGCCCTTGGGGACTGGGATATGAAGTTGCCTCGTGGTTCTCCCTCGCCTTTGATCGCAGAGCCTGAGTTTCATCAAGTGCTTCTAACTGAGGATGATGAGTTCCTCATCATAGGCTGTGATGGAATTTGGGATGTTATGACAAGTCAGCAGGCAGTTAGTCTTGCTCGTAGAAGCCTGAGGCGGCATTATGACCCAGAGCGATGTGCCAGGGACCTGGTCATGGAGGCACTACGCCTTAACACGTGTGATAATCTTACAGTGATTGTTGTGTGCTTCTCTTCTAATACTATTGATCACAGGGAGCCATCCCCTCCTTGCCAGAGGAAATTGAGGTGCTGCAGCCTTTCTGCAGAGGCGCTTTGTAGCTTGAGGAACTTGCTGGAAGGCAGTGCAAGCAACTGA 1188 0.4655 MVAEADLMRPQSTPAFDVQCFPNGTNICEIEDAVSTRPPSFDRVRASPLASALLFSSQEDIKAADGISNAARDSAVIQFVPSIRSGSFANIGPRRYMEDEHIRIDDLSSHMGSLYTFPEPSAFYGVFDGHGGPEAAAYIQKNVMRFFFEDVSFPQTSEVDNVFLQEAENSLRKSFLLADVALADDCSVSNSSGTTALTALIFGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPIYPLEQRRVEELGGHVDDGYLNGVLSVSRALGDWDMKLPRGSPSPLIAEPEFHQVLLTEDDEFLIIGCDGIWDVMTSQQAVSLARRSLRRHYDPERCARDLVMEALRLNTCDNLTVIVVCFSSNTIDHREPSPPCQRKLRCCSLSAEALCSLRNLLEGSASN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02732 395 SMART PP2C_4 74 352 IPR001932 -
Accr5g02732 395 Pfam Protein phosphatase 2C 88 346 IPR001932 -
Accr5g02732 395 FunFam Probable protein phosphatase 2C 22 68 357 - -
Accr5g02732 395 PANTHER PROTEIN PHOSPHATASE 2C 78 352 IPR015655 GO:0004722|GO:0006470
Accr5g02732 395 SUPERFAMILY PP2C-like 77 355 IPR036457 -
Accr5g02732 395 SMART PP2C_SIG_2 99 354 IPR001932 -
Accr5g02732 395 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Accr5g02732 395 Gene3D - 68 362 IPR036457 -
Accr5g02732 395 ProSiteProfiles PPM-type phosphatase domain profile. 84 354 IPR001932 -
Accr5g02732 395 CDD PP2Cc 83 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02732 Accr-Chr5 53295137 53297607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02732 97 391 PP2C-type Phosphatase Gene Family AT3G62260 70.707 1.51e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02732 K14803 - gmx:100819791 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02732 5 53295137 53297607 Accr5g02732 5 53295137 53297607 ECH