Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02726 ATGGGCATAAGGAAGGGTCCTTGGACTGTGGAAGAAGACACCATTCTGGTCAATTACATCGCCATCCACGGCGAAGGTCGCTGGAATTCCGTCGCCCGCTGTGCCGGTTTGAAGAGAACGGGCAAGAGTTGCAGGTTAAGGTGGCTAAACTACCTGCGTCCGGATGTTAGGCGTGGAAATATCACGCTGCAGGAACAGATAGTAATTCTTGATCTGCACTCTCGATGGGGAAACAGGTGGTCGAAAATAGCGCAGCACTTGCCAGGAAGAACGGACAATGAGATTAAGAATTATTGGAGGACGAGGGTGATGAAGCAGGCGAAGCAGCTCAAGTGCGATGTCAACAGCAAGCAGTTCAGAGACACCATGCGTTACGTGTGGATGCCCCGCTTGCTGGAGCGGATGCGGGCCTCCGCGTCTGAATACGACCCAAACAGGCAACCCATCCCCGTCGACCCGAATTACTCCTCCGTCACGCCTCGCAATATCCAGTTCCACCAAGCCCCGTCTTCTCATTGGCAGGCTCATCATGTTTCGGACGGCTCCCCAAGCGGGTCGGAAGTCTGCCCGCGGGTGGTATCGGAACAGGGAAACAGTGACTTGGGCGGCGGCGGCGGGGAGTGGGCTGAGACATTGTGGAGCGACGACAATATTTGGTTTTTGCAACAACAACTTTTCGAAGATCCGTAA 690 0.5464 MGIRKGPWTVEEDTILVNYIAIHGEGRWNSVARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLQEQIVILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVMKQAKQLKCDVNSKQFRDTMRYVWMPRLLERMRASASEYDPNRQPIPVDPNYSSVTPRNIQFHQAPSSHWQAHHVSDGSPSGSEVCPRVVSEQGNSDLGGGGGEWAETLWSDDNIWFLQQQLFEDP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02726 229 CDD SANT 62 101 IPR001005 -
Accr5g02726 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 107 IPR017930 -
Accr5g02726 229 FunFam Myb transcription factor 5 57 - -
Accr5g02726 229 ProSiteProfiles Myb-like domain profile. 1 52 IPR001005 -
Accr5g02726 229 CDD SANT 7 52 IPR001005 -
Accr5g02726 229 Gene3D - 61 124 - -
Accr5g02726 229 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 171 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr5g02726 229 FunFam MYB transcription factor 62 125 - -
Accr5g02726 229 ProSiteProfiles Myb-like domain profile. 53 103 IPR001005 -
Accr5g02726 229 Gene3D - 6 57 - -
Accr5g02726 229 SUPERFAMILY Homeodomain-like 1 99 IPR009057 -
Accr5g02726 229 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Accr5g02726 229 Pfam Myb-like DNA-binding domain 58 101 IPR001005 -
Accr5g02726 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 56 IPR017930 -
Accr5g02726 229 SMART sant 57 105 IPR001005 -
Accr5g02726 229 SMART sant 4 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02726 Accr-Chr5 53240189 53241105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02726 3 228 MYB Transcription Factor Family AT2G47190 52.823 1.51e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g02726 Myb_DNA-binding 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02726 K09422 - gmx:778065 299.671