Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02725 ATGAAGGTGGAAGGAGAGAGTAGGAGGAAGACACATCAGAGTGAAGATGAGATGGGCATAAGGAAGGGTCCTTGGACTGTGGAAGAAGACACCATTCTGGTCAATTACATCGCCATCCACGGCGAAGGTCGCTGGAATTCCGTCGCCCGCTGTGCCGGTTTGAAGAGAACGGGCAAGAGTTGCAGGTTAAGGTGGCTAAACTACCTGCGTCCGGATGTTAGGCGTGGAAATATCACGCTGCAGGAACAGATAGTAATTCTTGATCTGCACTCTCGATGGGGAAACAGGTGGTCGAAAATAGCGCAGCACTTGCCAGGAAGAACGGACAATGAGATTAAGAATTATTGGAGGACGAGGGTGATGAAGCAGGCGAAGCAGCTCAAGTGCGATGTCAACAGCAAGCAGTTCAGAGACACCATGCGTTACGTGTGGATGCCCCGCTTGCTGGAGCGGATGCGGGCCTCCGCGTCTGAATACGACCCAAACAGGCAACCCATCCCCGTCGACCCGAATTACTCCTCCGTCACGCCTCGCAATATCCAGTTCCACCAAGCCCCGTCTTCTCATTGGCAGGCTCATCATGTTTCGGACGGCTCCCCAAGCGGGTCGGAAGTCTGCCCGCGGGTGGTATCGGAACAGGGAAACAGTGACTTGGGCGGCGGCGGCGGGGAGTGGGCTGAGACATTGTGGAGCGACGACAATATTTGGTTTTTGCAACAACAACTTTTCGAAGATCCGTAA 741 0.5412 MKVEGESRRKTHQSEDEMGIRKGPWTVEEDTILVNYIAIHGEGRWNSVARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLQEQIVILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVMKQAKQLKCDVNSKQFRDTMRYVWMPRLLERMRASASEYDPNRQPIPVDPNYSSVTPRNIQFHQAPSSHWQAHHVSDGSPSGSEVCPRVVSEQGNSDLGGGGGEWAETLWSDDNIWFLQQQLFEDP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02725 246 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Accr5g02725 246 FunFam MYB transcription factor 79 142 - -
Accr5g02725 246 SUPERFAMILY Homeodomain-like 18 116 IPR009057 -
Accr5g02725 246 CDD SANT 24 69 IPR001005 -
Accr5g02725 246 SMART sant 74 122 IPR001005 -
Accr5g02725 246 SMART sant 21 71 IPR001005 -
Accr5g02725 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Accr5g02725 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Accr5g02725 246 Gene3D - 23 74 - -
Accr5g02725 246 FunFam Myb transcription factor 22 74 - -
Accr5g02725 246 MobiDBLite consensus disorder prediction 1 21 - -
Accr5g02725 246 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Accr5g02725 246 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Accr5g02725 246 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 188 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr5g02725 246 Gene3D - 78 141 - -
Accr5g02725 246 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Accr5g02725 246 CDD SANT 79 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02725 Accr-Chr5 53240189 53241156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02725 7 245 MYB Transcription Factor Family AT2G47190 51.724 2.14e-84 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g02725 Myb_DNA-binding 1.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02725 K09422 - gmx:778065 304.293