Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02724 ATGGAGAGAAGCCTGTCAGACTCTGGATCGTCAGGGAGTGAAGAGGAGATGATGGGGATAAGGAAAGGGCCGTGGACGGAGGAAGAGGATGCGATTCTGGCCAACCACATCTCCTTTCACGGCGAAGGTCACTGGAACTCTCTCGCTCGCTCCGCTGGTCTGAAGCGAACGGGGAAAAGCTGCAGATTGAGATGGCTAAACTACCTGCGTCCTGGTGTCCGGCGTGGCAATATAACCCTCCAAGAACAGCTCTTGATTCTTAATCTCCATTCCCGATGGGGCAACAGGTGGTCGAAGATAGCGCAAGAGTTTCCAGGGAGGACAGACAATGAGATAAAGAACTATTGGAGGACGCGAGTGGTGAAGCAGGCCAAACAAATGAAATGTGATGTGAATAGCAAAGAGTTTAGAGACGCCTTGCGTTTCGTCTGGATTCCTCGCCTGGTCGAGCGCATCCAGGCATCGTCATCGTCTCACACTGCATCACCCACCAGCTTCCACTGCTATACGGACGCCACTTCTCTGTCTGATCATTCCATGGCCAGTGGTGACAACGACACCTCCTCTCTTCCTCCTTCTGCAGAAAAACAAGCCACAGCCTCTGGGATTCATCACTTGGAATATTCCCCAGAACTCCAACCATTTGAAGAGGCCAATGCTGATTTCTGGACTTACGAAAACATATGCTTCTTGCAGCAACAGCTTGCCGATGACTCCTGA 720 0.5153 MERSLSDSGSSGSEEEMMGIRKGPWTEEEDAILANHISFHGEGHWNSLARSAGLKRTGKSCRLRWLNYLRPGVRRGNITLQEQLLILNLHSRWGNRWSKIAQEFPGRTDNEIKNYWRTRVVKQAKQMKCDVNSKEFRDALRFVWIPRLVERIQASSSSHTASPTSFHCYTDATSLSDHSMASGDNDTSSLPPSAEKQATASGIHHLEYSPELQPFEEANADFWTYENICFLQQQLADDS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02724 239 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 19 197 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr5g02724 239 MobiDBLite consensus disorder prediction 1 20 - -
Accr5g02724 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Accr5g02724 239 CDD SANT 24 69 IPR001005 -
Accr5g02724 239 MobiDBLite consensus disorder prediction 177 200 - -
Accr5g02724 239 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Accr5g02724 239 MobiDBLite consensus disorder prediction 177 196 - -
Accr5g02724 239 Gene3D - 79 120 - -
Accr5g02724 239 SUPERFAMILY Homeodomain-like 18 116 IPR009057 -
Accr5g02724 239 Gene3D - 22 74 - -
Accr5g02724 239 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Accr5g02724 239 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Accr5g02724 239 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Accr5g02724 239 SMART sant 74 122 IPR001005 -
Accr5g02724 239 SMART sant 21 71 IPR001005 -
Accr5g02724 239 FunFam Myb transcription factor 22 74 - -
Accr5g02724 239 FunFam MYB transcription factor 79 142 - -
Accr5g02724 239 CDD SANT 79 118 IPR001005 -
Accr5g02724 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02724 Accr-Chr5 53223868 53224809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02724 1 210 MYB Transcription Factor Family AT2G47190 57.143 1.11e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g02724 Myb_DNA-binding 2.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02724 K09422 - gmx:100777932 285.804