Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02723 ATGGATCATCATCAAGTGTTAGATTACTGTAATAATATGAATAATAACATTAAGTATAGGGGTGGTGAGATGGAGAGAAGCCTGTCAGACTCTGGATCGTCAGGGAGTGAAGAGGAGATGATGGGGATAAGGAAAGGGCCGTGGACGGAGGAAGAGGATGCGATTCTGGCCAACCACATCTCCTTTCACGGCGAAGGTCACTGGAACTCTCTCGCTCGCTCCGCTGGTCTGAAGCGAACGGGGAAAAGCTGCAGATTGAGATGGCTAAACTACCTGCGTCCTGGTGTCCGGCGTGGCAATATAACCCTCCAAGAACAGCTCTTGATTCTTAATCTCCATTCCCGATGGGGCAACAGGTGGTCGAAGATAGCGCAAGAGTTTCCAGGGAGGACAGACAATGAGATAAAGAACTATTGGAGGACGCGAGTGGTGAAGCAGGCCAAACAAATGAAATGTGATGTGAATAGCAAAGAGTTTAGAGACGCCTTGCGTTTCGTCTGGATTCCTCGCCTGGTCGAGCGCATCCAGGCATCGTCATCGTCTCACACTGCATCACCCACCAGCTTCCACTGCTATACGGACGCCACTTCTCTGTCTGATCATTCCATGGCCAGTGGTGACAACGACACCTCCTCTCTTCCTCCTTCTGCAGAAAAACAAGCCACAGCCTCTGGGATTCATCACTTGGAATATTCCCCAGAACTCCAACCATTTGAAGAGGCCAATGCTGATTTCTGGACTTACGAAAACATATGCTTCTTGCAGCAACAGCTTGCCGATGACTCCTGA 789 0.4968 MDHHQVLDYCNNMNNNIKYRGGEMERSLSDSGSSGSEEEMMGIRKGPWTEEEDAILANHISFHGEGHWNSLARSAGLKRTGKSCRLRWLNYLRPGVRRGNITLQEQLLILNLHSRWGNRWSKIAQEFPGRTDNEIKNYWRTRVVKQAKQMKCDVNSKEFRDALRFVWIPRLVERIQASSSSHTASPTSFHCYTDATSLSDHSMASGDNDTSSLPPSAEKQATASGIHHLEYSPELQPFEEANADFWTYENICFLQQQLADDS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02723 262 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 42 220 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr5g02723 262 SUPERFAMILY Homeodomain-like 41 139 IPR009057 -
Accr5g02723 262 CDD SANT 47 92 IPR001005 -
Accr5g02723 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 96 IPR017930 -
Accr5g02723 262 MobiDBLite consensus disorder prediction 200 223 - -
Accr5g02723 262 Gene3D - 102 143 - -
Accr5g02723 262 Gene3D - 45 97 - -
Accr5g02723 262 ProSiteProfiles Myb-like domain profile. 93 143 IPR001005 -
Accr5g02723 262 SMART sant 97 145 IPR001005 -
Accr5g02723 262 SMART sant 44 94 IPR001005 -
Accr5g02723 262 MobiDBLite consensus disorder prediction 200 219 - -
Accr5g02723 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 147 IPR017930 -
Accr5g02723 262 Pfam Myb-like DNA-binding domain 45 92 IPR001005 -
Accr5g02723 262 Pfam Myb-like DNA-binding domain 98 141 IPR001005 -
Accr5g02723 262 ProSiteProfiles Myb-like domain profile. 40 92 IPR001005 -
Accr5g02723 262 FunFam Myb transcription factor 45 97 - -
Accr5g02723 262 CDD SANT 102 141 IPR001005 -
Accr5g02723 262 MobiDBLite consensus disorder prediction 24 43 - -
Accr5g02723 262 FunFam MYB transcription factor 102 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02723 Accr-Chr5 53223868 53224878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02723 33 233 MYB Transcription Factor Family AT2G47190 58.706 3.86e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g02723 Myb_DNA-binding 2.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02723 K09422 - gmx:100777932 285.804