Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02722 ATGTTTGCCAAAACTCGTACCCAATTGATTCTGCTGCTTCTTTCATTTTCATGCGCCTCTTGCAAGCCTCCCACTTGGAACTCAGACAACCGTACAGATTATGAGAATAGGATTTCGTGGAACCTCCAGAATTACCACAAGGCCACGCTTTTGAAGACTCAATGGAATGCTAAAGCCCCTGATGATGTTCTGAAGCTGCGGATGGCTGAGACTAACAGGGTTAATATCACAGTTCTCCAAGACTCTACCGGTGACTTCAGCACCATCACACAAGCGCTGGACAGCATTCCACCACGCAACACCAGAAGAGTTATAGTTTCCATTGGACCGGGCGTCTACAGGGAGAAGATTGTGATACCCAGAAATAAACACTTCATAACATTGTTGGGGGACGCCACGAATCCGCCAACAATTACAGGGAACGATACGGCATCCATCATTGGAAGGGATGGGATGCCATTAGGCACAATCCGCAGTGCCACCGTTGCTGTGGATGCTAATTATTTTGTCGCCGTCAACATCAGATTTGAGAACACGGCATGGCATGAGATAGGAAAGGCGGGAGGACAAGCGGTGGCGGTTCGCATCTCAGGGACGAAAGCCGCATTTTACAACTGCAGCTTCTATGGGGATCAAGACACGCTCTACGACCACAAAGGACTTCACTACTTCAAGAATTGCTTCGTTCAAGGCTCTGTGGATTTCATCTTCGGCTCCGGCAGATCCCTTTACGAGAACTGCAATCTGAATTCAATAGCGAAGAAGGCGGTCTCGATCACGGCTCAGAAGCGCACAAATGCGTCGTTAGAGAGTGGGTTTTCGTTTAAGAACTGCTCCATAACGGGAAGCGGGCAAGTATATCTGGGAAGAGCGTGGGGGGATTATTCGAGGGTTGTTTTCTGTTACACCTACATGGACAAGATTGTTGTGCCCCAAGGCTGGAGTGACTGGGGTGACCAAAAGCGCGACTTGAGAGCGTATTATGGAGAATACAAGTGCAGTGGGCCTGGGGCTAACTTAACAGGAAGAGTGTCATGGGCACGCATACTCACCGATCAACAGGCTCTGCCTTTCCTTGGAACCCATTTCATTGACGGCGACACTTGGCTCCTTCCCCTCCCCTTTTGA 1128 0.4947 MFAKTRTQLILLLLSFSCASCKPPTWNSDNRTDYENRISWNLQNYHKATLLKTQWNAKAPDDVLKLRMAETNRVNITVLQDSTGDFSTITQALDSIPPRNTRRVIVSIGPGVYREKIVIPRNKHFITLLGDATNPPTITGNDTASIIGRDGMPLGTIRSATVAVDANYFVAVNIRFENTAWHEIGKAGGQAVAVRISGTKAAFYNCSFYGDQDTLYDHKGLHYFKNCFVQGSVDFIFGSGRSLYENCNLNSIAKKAVSITAQKRTNASLESGFSFKNCSITGSGQVYLGRAWGDYSRVVFCYTYMDKIVVPQGWSDWGDQKRDLRAYYGEYKCSGPGANLTGRVSWARILTDQQALPFLGTHFIDGDTWLLPLPF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02722 375 FunFam Pectinesterase 71 372 - -
Accr5g02722 375 ProSitePatterns Pectinesterase signature 2. 229 238 IPR033131 -
Accr5g02722 375 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 69 370 - -
Accr5g02722 375 Gene3D - 70 373 IPR012334 -
Accr5g02722 375 Pfam Pectinesterase 75 367 IPR000070 GO:0030599|GO:0042545
Accr5g02722 375 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Accr5g02722 375 SUPERFAMILY Pectin lyase-like 73 372 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02722 Accr-Chr5 53206345 53208071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02722 76 372 Carbohydrate Esterase AT5G47500 47.157 8.35e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02722 K01051 - qsu:112011696 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02722 5 53206345 53208071 Accr5g02722 5 53206345 53208071 ECH