Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02717 ATGGAGAAGAAAGAGATGGGTGGTGTCAAGACGGAGGAAAAAGTTGGATCCTCTTTGTTTGGGGATTATAATTCAAACAGTTTCCCACTTTCCAACGTCTTTGATTTTCATGAAGTCGAAAGGAGCTCTTTAGGGTTTATGGAGTTACTGGGCGTGCAGGGGCAGGACCATGGTTCTCTACTGCATTTGTCCCAGCACCTATTTCCTTCTCACCTCAACAATCAATGTGCCGCTGCAAATAACTGCTGCGAGCCGTTGAATCAACAGCCCGCCACTCCAAACTCTTCATCGATTTCATCTGCGTCCAGCGAGGCAGTGATGGATGAACACACTAAAACTGTAGATCAGCGAGGAGATGAGCAACCAAAGACCAAGAACCAGTTGAAGGCCAAGAAGACAAATCAGAAGAAACAGAGGGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGATGATGGGTACAGGTGGAGAAAGTACGGTCAAAAAGCAGTGAAGAACAGCCCCTTTCCCAGAAGCTACTATCGTTGCACCAGTGCTTCATGTAATGTGAAGAAACGAGTGGAACGATCCTTTACTGATTCAACCATTGTTGTCACGACCTACGAAGGTCAACACACACATCCAAGCCCACTCATGCCTCGTAATTCCACTCTCGCCGGAGCTTTGGCGCCAGCGGTGGTCTCCTACGGATGTGGTTCAGGAAACTTATCCCAGCAGTATCATCATGAGCAGCTCCCACATCATGATCATCATTTCCTTGCTAACACATTGTCGTCTTTGGGTTTTACTCGCATTTGTGGTTCAAAGAGTAGCATTGCCGCTTTTCCTCAAGACAGAATGCCTTGTAATCCAGGGACCAGTGCTTTTTTAAGGGACCATGGCCTTCTCCAAGATATTATTCCTTCCCATATGCTGAAAGAAGAGTAG 939 0.4696 MEKKEMGGVKTEEKVGSSLFGDYNSNSFPLSNVFDFHEVERSSLGFMELLGVQGQDHGSLLHLSQHLFPSHLNNQCAAANNCCEPLNQQPATPNSSSISSASSEAVMDEHTKTVDQRGDEQPKTKNQLKAKKTNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDSTIVVTTYEGQHTHPSPLMPRNSTLAGALAPAVVSYGCGSGNLSQQYHHEQLPHHDHHFLANTLSSLGFTRICGSKSSIAAFPQDRMPCNPGTSAFLRDHGLLQDIIPSHMLKEE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02717 312 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g02717 312 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g02717 312 MobiDBLite consensus disorder prediction 108 141 - -
Accr5g02717 312 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 242 IPR044810 GO:0003700
Accr5g02717 312 MobiDBLite consensus disorder prediction 88 141 - -
Accr5g02717 312 SUPERFAMILY WRKY DNA-binding domain 146 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g02717 312 PIRSF WRKY_txn_fact_IIc 1 312 IPR017396 GO:0003700
Accr5g02717 312 Gene3D WRKY domain 139 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g02717 312 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g02717 312 MobiDBLite consensus disorder prediction 88 107 - -
Accr5g02717 312 FunFam WRKY transcription factor 57 140 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02717 Accr-Chr5 53126287 53127647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02717 20 312 WRKY Transcription Factor Family AT2G47260 44.444 1.19e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr5g02717 WRKY 3.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02717 - - pcin:129306881 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03303 2 68680256 68681782 Accr5g02717 5 53126287 53127647 CCT
Accr5g02717 5 53126287 53127647 Accr5g02717 5 53126287 53127647 ECH