Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02716 ATGGGAGTTTCTTCACAGCCTTTCCCTGTTTCCCTGTCTTTGAAAGACCAGCTTCCAGAAGCTGGTCAGGAAGACAGAAATTCGTCATCGTACGGATGCCTGTGGAGCGAGGTGGTGGCAGGGCGAGGCATGAAGCACAAGGCGAGGAGGGTTTTGATGAAGAGAAGGCCTCGCGTGATACAAGGTTCTAGAAGACGAGGGGCCGTGGGGATTAAGACGAGGATCAGAACTTTGAAGAGGCTTATACCCAGAAAGAACAGCGAGTCCGTGGGGTTGGAAGGGCTGTTCAGTGATACCGCCGACTACATCCTGTCGTTACAAACGAGGGTGAGGGTCATGCAGGTTATGGTTGACGTATTGACTGCTTCTGATGAGTGA 378 0.5212 MGVSSQPFPVSLSLKDQLPEAGQEDRNSSSYGCLWSEVVAGRGMKHKARRVLMKRRPRVIQGSRRRGAVGIKTRIRTLKRLIPRKNSESVGLEGLFSDTADYILSLQTRVRVMQVMVDVLTASDE 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02716 125 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 120 IPR044660 GO:0006355
Accr5g02716 125 CDD bHLH_AtIBH1_like 63 117 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02716 Accr-Chr5 53120056 53120433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02716 45 124 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 46.988 6.14e-17 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02716 - - gmx:100794627 130.183