Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02707 ATGGTTCAGAAAACAGTTGTGAGGGTGAAAGTGGGAGAAAATGTAAGTAAACTGAAGAATGAAGGGCTACCATCGGACTCATGGTCTTGGAGGAAATATGGACAAAAGCCTATTAAAGGATCTCCTTATCCAAGAGGCTACTACAAGTGCAGCACATCCAAAGGTTGTTCGGCCAAGAAGCAAATAGAGAGATGCAGAACAGAAGCTTCAATGCTCATTGTCACCTATACTTCTTCCCATAACCATCCAGCTCCAGAATTACCCTTCAAAGAATCAAAAACTCAAGCTACTGAAGATCCCTCACCTGATACTTCAAAGGCCAAAGACCAAGAGCAAGAGGAAGAGAAGAAAGAACTTCAACTTGCAAAAGCTAGCGATCAAGGTACAAATGAAGAAAATTTTCATTACCTGCAATCCCCAATAGGCTGTTCTGAAGATATTATTATTGATGACCAAGAGGATGTTTTCAAATTGAATCCGGAGAAAACGCAAGAGAGGATAGATCCTCTTTTAGAGGTAGAGCCCCTCTCTTATTCTCAGCTGAAGGACCTCTCAACGCTCAAATCGGAGGAACTCGACTACTTCGACGAGCTTGAAGAGTTACCCATGTCTCCATCTTTATGGAACTTGATGAGGAACAACTTTTCCAACGAAAGGATTCCGGTGGCCCCGTCATAA 678 0.4248 MVQKTVVRVKVGENVSKLKNEGLPSDSWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQIERCRTEASMLIVTYTSSHNHPAPELPFKESKTQATEDPSPDTSKAKDQEQEEEKKELQLAKASDQGTNEENFHYLQSPIGCSEDIIIDDQEDVFKLNPEKTQERIDPLLEVEPLSYSQLKDLSTLKSEELDYFDELEELPMSPSLWNLMRNNFSNERIPVAPS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02707 225 Coils Coil 107 127 - -
Accr5g02707 225 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 204 IPR044810 GO:0003700
Accr5g02707 225 Gene3D WRKY domain 10 86 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g02707 225 SMART WRKY_cls 24 84 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g02707 225 MobiDBLite consensus disorder prediction 79 136 - -
Accr5g02707 225 FunFam WRKY transcription factor 65 6 85 - -
Accr5g02707 225 Pfam WRKY DNA -binding domain 26 83 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g02707 225 ProSiteProfiles WRKY domain profile. 19 85 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g02707 225 SUPERFAMILY WRKY DNA-binding domain 21 85 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g02707 225 MobiDBLite consensus disorder prediction 92 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02707 Accr-Chr5 53019694 53020462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02707 16 85 WRKY Transcription Factor Family AT2G34830 71.429 3.85e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr5g02707 WRKY 8.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02707 - - gmx:100127368 297.36