Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr5g02706 | ATGGATGGTACTGCCTCGCCTGAACTTGAGTCAGAAGAATCTACGGCTCTCATACCAGAAATTCAAGAATTCAAAAAAAGGAAAATGGTTCAGAAAACAGTTGTGAGGGTGAAAGTGGGAGAAAATGTAAGTAAACTGAAGAATGAAGGGCTACCATCGGACTCATGGTCTTGGAGGAAATATGGACAAAAGCCTATTAAAGGATCTCCTTATCCAAGAGGCTACTACAAGTGCAGCACATCCAAAGGTTGTTCGGCCAAGAAGCAAATAGAGAGATGCAGAACAGAAGCTTCAATGCTCATTGTCACCTATACTTCTTCCCATAACCATCCAGCTCCAGAATTACCCTTCAAAGAATCAAAAACTCAAGCTACTGAAGATCCCTCACCTGATACTTCAAAGGCCAAAGACCAAGAGCAAGAGGAAGAGAAGAAAGAACTTCAACTTGCAAAAGCTAGCGATCAAGGTACAAATGAAGAAAATTTTCATTACCTGCAATCCCCAATAGGCTGTTCTGAAGATATTATTATTGATGACCAAGAGGATGTTTTCAAATTGAATCCGGAGAAAACGCAAGAGAGGATAGATCCTCTTTTAGAGGTAGAGCCCCTCTCTTATTCTCAGCTGAAGGACCTCTCAACGCTCAAATCGGAGGAACTCGACTACTTCGACGAGCTTGAAGAGTTACCCATGTCTCCATCTTTATGGAACTTGATGAGGAACAACTTTTCCAACGAAAGGATTCCGGTGGCCCCGTCATAA | 762 | 0.4226 | MDGTASPELESEESTALIPEIQEFKKRKMVQKTVVRVKVGENVSKLKNEGLPSDSWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQIERCRTEASMLIVTYTSSHNHPAPELPFKESKTQATEDPSPDTSKAKDQEQEEEKKELQLAKASDQGTNEENFHYLQSPIGCSEDIIIDDQEDVFKLNPEKTQERIDPLLEVEPLSYSQLKDLSTLKSEELDYFDELEELPMSPSLWNLMRNNFSNERIPVAPS | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr5g02706 | 253 | MobiDBLite | consensus disorder prediction | 120 | 150 | - | - | |
Accr5g02706 | 253 | FunFam | WRKY transcription factor 65 | 32 | 113 | - | - | |
Accr5g02706 | 253 | Coils | Coil | 135 | 155 | - | - | |
Accr5g02706 | 253 | MobiDBLite | consensus disorder prediction | 104 | 164 | - | - | |
Accr5g02706 | 253 | Gene3D | WRKY domain | 36 | 114 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Accr5g02706 | 253 | Pfam | WRKY DNA -binding domain | 54 | 111 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Accr5g02706 | 253 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 18 | 232 | IPR044810 | GO:0003700 | |
Accr5g02706 | 253 | SMART | WRKY_cls | 52 | 112 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Accr5g02706 | 253 | SUPERFAMILY | WRKY DNA-binding domain | 49 | 113 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Accr5g02706 | 253 | ProSiteProfiles | WRKY domain profile. | 47 | 113 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr5g02706 | Accr-Chr5 | 53019476 | 53020462 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr5g02706 | 19 | 113 | WRKY Transcription Factor Family | AT2G34830 | 59.375 | 3.75e-34 | 125 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Accr5g02706 | WRKY | 1.1e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr5g02706 | - | - | gmx:100127368 | 312.768 |