Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02664 ATGTGTCACGGTGCTATTATCGCTGACTTCATTCCTCGCCACCGTTGTCGCCGCCTTACCCCCTCCGACATCTGGCCCGACACATTTGGAAACCACCATGACCTCCCCTCGGAGTTTTCTCACTCCGTTCGCCTCCAAAACCCTCAACTTTCCACAGTAGCTGAGCAGGCTGAGAAGCCGGCCAAGAGGCAGAGGAAGAACCTTTACAGAGGGATTCGGCAGCGTCCGTGGGGTAAATGGGCCGCGGAGATTCGTGATCCGAGGAAAGGTGTTCGTGTTTGGCTCGGCACTTACAACACCGCGGAGGAAGCTGCCAGGGCCTATGATAAAGAAGCTCGTAAAATCCGCGGCAAGAAAGCCAAGGTCAATTTTCCCAACGAAGACGAGGATCGCTCCGTTCAAGCCCGTCGCAACCCACCAGCTCCACCGACAAGCCTGAACTTGGAGTTCGGTTATGATCTGAACCAAGCGGGGGCAACTTGTTCTTACCGGCGGGGAGAGTCGGGGTCAGAGTACTCGAAGAAGGTGTGCATAGATGGGGAGGAAGAAGAGAACCAGGCCGGGGAGCTATCAGAGGAGCTGATGGCGTACGAGAATTACCTGAAGCAATATCAGATTCCATACTGCGATGGCCAACCGGCGACTCGAAATGCCGTTCAGGAGAACGCGGTGGGCGACTTGTGGAGCTTCGACGACGAAAACATTGCTGCGTGCATGACATCGTCCGCCATGTGA 735 0.5565 MCHGAIIADFIPRHRCRRLTPSDIWPDTFGNHHDLPSEFSHSVRLQNPQLSTVAEQAEKPAKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTYNTAEEAARAYDKEARKIRGKKAKVNFPNEDEDRSVQARRNPPAPPTSLNLEFGYDLNQAGATCSYRRGESGSEYSKKVCIDGEEEENQAGELSEELMAYENYLKQYQIPYCDGQPATRNAVQENAVGDLWSFDDENIAACMTSSAM 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02664 244 FunFam Ethylene-responsive transcription factor 2 67 126 - -
Accr5g02664 244 MobiDBLite consensus disorder prediction 124 149 - -
Accr5g02664 244 CDD AP2 69 126 IPR001471 GO:0003700|GO:0006355
Accr5g02664 244 SUPERFAMILY DNA-binding domain 68 126 IPR016177 GO:0003677
Accr5g02664 244 SMART rav1_2 68 131 IPR001471 GO:0003700|GO:0006355
Accr5g02664 244 Gene3D AP2/ERF domain 68 126 IPR036955 GO:0003700|GO:0006355
Accr5g02664 244 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Accr5g02664 244 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Accr5g02664 244 PANTHER DNA-BINDING DOMAIN 51 173 IPR044808 GO:0003700|GO:0009873
Accr5g02664 244 ProSiteProfiles AP2/ERF domain profile. 68 125 IPR001471 GO:0003700|GO:0006355
Accr5g02664 244 Pfam AP2 domain 69 117 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02664 Accr-Chr5 52708555 52709384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02664 1 234 AP2-EREBP Transcription Factor Family AT2G47520 41.880 9.93e-49 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g02664 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02664 K09286 - qsa:O6P43_010814 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02664 5 52708555 52709384 Accr5g02664 5 52708555 52709384 ECH