Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02657 ATGTCCACCATGCAGCACCACAAGAGAAGAACACTCTCATCGGCCCTTGTTTCTCTACTCTTGCTGCTTGTGCAAGCAACAGAACCACAAGAAACAACACACCTGCATTTTCACAAACACCTTCAAGTAGCTCACTCCACCTGCCAAGGAACACTCTACCCTGACCTATGTGTCTCCACGCTGGCCTCCTTCCCGGATCTTACCTCTAAATCTGTTCCGCAAGTCATATGTTCCCTCGTCAACCACACCATGTACGAGGTCAGATCCTCGTCCTCCAACTGTACTGGTCTCAAAAGAAAGCTCCGAAATCTGAACCCGCTTCAACAAAGAGCTCTCGATGACTGCCTCCAACTTTTTGATCACACTCAGGAGGAGTTCAAAACCAGCTTGGCCGATCTCTCCTATAAAAAGATCGATTCCAAGCGCTACCACGACTCACGGACTCTGCTGAGCGGCGCATTGACCAATGTTTACACGTGCCTCGACGGCTTTGCAGACGGCGACACCAATGGACACGTGAGACGCATCATCCAGGACAACTTGTATCGGATTTGCCACCACGTTAGTAACTCATTGGCCTTGCTCAACAAAGTGAAAAAGGGGGTGAAGACCCAGTCTCCGTCCGAGGCATTCAAAATGAGGCATAATGGTGGCTTCCCATCTTGGCTTACCTCAAAAGACAGAAGGCTCCTTCAAGCTGCTGTTAATAAAACCAAGTTCGATCTCTTGGTGGCCAAAGATGGCTCCGGCAATTTCACCACAATCGGGGAAGCAGTAGCTGCCGCTCCAAACTCTACCACAACCAGGTTTGTGATACACATAAAGGCTGGGGCATACTTTGAGAATGTGGAGGTGATAAAGAAAAAGACGAATTTGATGTTCGTTGGAGACGGGATTGGGAAGACGATAGTGAAGGCCAGTAGAAACGTGGTGGATGGGTGGACCACCTTTCAATCCGCTACTGTAGCGGTGGTAGGAGACGGATTCATAGCGAAGGGGATAACCATAGAGAACTCGGCGGGGCCCAGCAAGCACCAGGCCGTGGCCCTCAGGAACGGCGCCGACCTCTCGGCCTTCTACCAATGCAGCTTCGTCGGCTACCAGGATACCCTCTATGTCCATTCCCTCCGTCAGTTCTACCGGGAATGTGACATCTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCAGCCGTGCTCCAGAACTGTAATCTGTACGCGCGGAAGCCCAACGACAACCAGAAGAACCTGTTCACGGCCCAAGGCAGAGAGGACCCGAACCAGAACACAGGCATTTCCATCATAAACTCCAAGGTGGCGGCGGCGTCGGACTTGATCCCGGTGAAGTCATCGTTCCCGACGTACCTGGGGAGGCCATGGAAATTGTACTCGAGGACGGTGTATTTGGGATGTTACATGGAGGATTTGATAAATCCGGCAGGGTGGTTGGAATGGAACGGGTCGTTTGCACTGGATACTCTGTACTACGGGGAGTACAAGAACAGTGGTCCAGGTTCCAATACGAGCGGGAGGGTAACGTGGAAAGGTTACAGGGTGATCAATTCCTCCACAGAGGCTTCACAGTTCACTGTTGCCCAGTTCATTCAAGGCTACGACTGGTTGAATTCCACCGGTGTTCCATTCTTCCCTGGTCTCAGCCCCTGA 1665 0.5195 MSTMQHHKRRTLSSALVSLLLLLVQATEPQETTHLHFHKHLQVAHSTCQGTLYPDLCVSTLASFPDLTSKSVPQVICSLVNHTMYEVRSSSSNCTGLKRKLRNLNPLQQRALDDCLQLFDHTQEEFKTSLADLSYKKIDSKRYHDSRTLLSGALTNVYTCLDGFADGDTNGHVRRIIQDNLYRICHHVSNSLALLNKVKKGVKTQSPSEAFKMRHNGGFPSWLTSKDRRLLQAAVNKTKFDLLVAKDGSGNFTTIGEAVAAAPNSTTTRFVIHIKAGAYFENVEVIKKKTNLMFVGDGIGKTIVKASRNVVDGWTTFQSATVAVVGDGFIAKGITIENSAGPSKHQAVALRNGADLSAFYQCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVLQNCNLYARKPNDNQKNLFTAQGREDPNQNTGISIINSKVAAASDLIPVKSSFPTYLGRPWKLYSRTVYLGCYMEDLINPAGWLEWNGSFALDTLYYGEYKNSGPGSNTSGRVTWKGYRVINSSTEASQFTVAQFIQGYDWLNSTGVPFFPGLSP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02657 554 FunFam Pectinesterase 235 552 - -
Accr5g02657 554 PANTHER PECTINESTERASE 21 542 - -
Accr5g02657 554 SMART PMEI_2 39 194 IPR006501 GO:0004857
Accr5g02657 554 SUPERFAMILY Pectin lyase-like 239 551 IPR011050 -
Accr5g02657 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 200 IPR035513 -
Accr5g02657 554 CDD PMEI-like_3 46 197 - -
Accr5g02657 554 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Accr5g02657 554 NCBIfam pectinesterase inhibitor domain 14 197 IPR006501 GO:0004857
Accr5g02657 554 Pfam Plant invertase/pectin methylesterase inhibitor 45 194 IPR006501 GO:0004857
Accr5g02657 554 Gene3D - 235 552 IPR012334 -
Accr5g02657 554 Pfam Pectinesterase 241 537 IPR000070 GO:0030599|GO:0042545
Accr5g02657 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 198 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02657 Accr-Chr5 52659737 52663157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02657 68 548 Carbohydrate Esterase AT4G02320 52.236 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02657 K01051 - gmx:100802881 823.542