Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02656 ATGGCTTTCAAGCTCAAGTCTCTTGTTATTTTTACAGGCTCCCTCTACCTTCTGCTTTCCTTATTCGCAGTGCTATCTCTAGCAGGGAACCCAGCGGCCACCACCATAACCCCTCCAGACGCAGTCTGTGAAACCACCAGGTACCCTCCCCTGTGCAAAACCCTGCTTGGTAATCAAAATGGCAACGTCTTTGTCTTTGGCCGCATATTGCTTCGAAAGTCCTTATCCCAGTCTCGCCGATTCTTGAACCAGTTGGATTCCTATCTACAATCTCCATCCTCTCTGTCTCAGCCCACCATTGGAGCTCTCGAGGACTGTCGCTTCCTCGCTGGCCTCAACTTCGACTACTTATCCGACGCCCTGGACGCTGTGAAGAATCTCAATGACTTCCTGTCTTCCTCCCAAGCCCAAGACCTTCAAACCGTATTCAGTGCCGTCCTCACCAACCAGCAGACATGTCAGGATGGCCTACAAACCACTGCTTCGGATGGAAGAGCAAAGGACGATATTTCTTCCGTACTCTCCGACGATAACAAGCTTCACAGCGTGTCTCTTGCTCTCTTCACCAAAGGTTGGGTACCCAAGAAGAATATCACAACCTCATGGCCAAACAATGGGGTGCATTTGGACTTCAGGCATGGTCGTTTGCCATTGAAAATGTCTCCCCGAGTTGAGGCCATTTTCAACTCCTCAAAAAGCCACGGCAGGAAACTGCTCCAGTCGGACCAAAGTGTGGTGATCACCGACATCGTGGTTGTCAGTCAGGATGGAAGCGGAAACTTCACCGCCATCAACGACGCCATCAACGCTGCCCCTAACAACACAGCTTCCGGTGTCGGTTACTTCTTAGTATACATCACCGAGGGTGTCTACCAAGAATATGTTTCCATACCCAAAAACAAGAAGTACTTGATGTTATTGGGAGACGGCATCAACAGCACCATCATCACTGGCGAACACAACGTCGTCGACAATTATACAACATTCAACTCAGCGACATTTGCCGTGGTGGCACAAGGATTCGTGGCGGTGAGCATTACATTCCGTAACACGGCGGGGCCGGACAAGCACCAAGCCGTTGCCGTGAGGAACGGAGCGGACCTGTCCGCGTTCTACAGCTGCAGCTTCGAAGGGTACCAAGACACTCTGTACGCACATTCTCTGAGACAATTCTACAGAGAATGTGACATATACGGAACCGTGGACTTCATATTTGGGAACGCAGCCGTGGTTCTGCAAAACTGCAACCTGTATCCCCGGCTTCCATTGAGTGGTCAGTTCAACGCGATCACGGCACAGGGTCGAACGGACCCCAATCAAAACACAGGCACGTCCATTCAGAACGCGACCATAAAAGCGGCCGACGATTTGGCTCCGTCAGTAGGGTCAGTGCAGACATACCTGGGGAGGCCGTGGAAGGAGTACTCGAGGACGGTGTTTATGGAGTCATGGATGGACAATCTCATCGATCCTGCTGGGTGGCAGGTGTGGGACGGCACCTTTGCTTTGAGCACGTTGTACTACGCAGAGTATAACAACAGTGGGCCCGGTGCTGACACGAGCAGTAGGGTGACGTGGCAAGGTTACCACGTCATCAATGCGACGGATGCGGCTAATTTCACGGTGTCCAACTTCTTGATGGGAGATGCTTGGTTGCCTCAAACTGGGGTCCCATACTCTCCTGGACTTTGA 1692 0.5177 MAFKLKSLVIFTGSLYLLLSLFAVLSLAGNPAATTITPPDAVCETTRYPPLCKTLLGNQNGNVFVFGRILLRKSLSQSRRFLNQLDSYLQSPSSLSQPTIGALEDCRFLAGLNFDYLSDALDAVKNLNDFLSSSQAQDLQTVFSAVLTNQQTCQDGLQTTASDGRAKDDISSVLSDDNKLHSVSLALFTKGWVPKKNITTSWPNNGVHLDFRHGRLPLKMSPRVEAIFNSSKSHGRKLLQSDQSVVITDIVVVSQDGSGNFTAINDAINAAPNNTASGVGYFLVYITEGVYQEYVSIPKNKKYLMLLGDGINSTIITGEHNVVDNYTTFNSATFAVVAQGFVAVSITFRNTAGPDKHQAVAVRNGADLSAFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYPRLPLSGQFNAITAQGRTDPNQNTGTSIQNATIKAADDLAPSVGSVQTYLGRPWKEYSRTVFMESWMDNLIDPAGWQVWDGTFALSTLYYAEYNNSGPGADTSSRVTWQGYHVINATDAANFTVSNFLMGDAWLPQTGVPYSPGL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02656 563 CDD PMEI-like_3 41 192 - -
Accr5g02656 563 Pfam Plant invertase/pectin methylesterase inhibitor 41 186 IPR006501 GO:0004857
Accr5g02656 563 NCBIfam pectinesterase inhibitor domain 17 189 IPR006501 GO:0004857
Accr5g02656 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 190 IPR035513 -
Accr5g02656 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 190 IPR035513 -
Accr5g02656 563 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Accr5g02656 563 Gene3D - 245 563 IPR012334 -
Accr5g02656 563 PANTHER PECTINESTERASE 24 553 - -
Accr5g02656 563 Pfam Pectinesterase 251 549 IPR000070 GO:0030599|GO:0042545
Accr5g02656 563 SMART PMEI_2 34 187 IPR006501 GO:0004857
Accr5g02656 563 FunFam Pectinesterase 244 563 - -
Accr5g02656 563 SUPERFAMILY Pectin lyase-like 247 562 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02656 Accr-Chr5 52647696 52649468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02656 5 563 Carbohydrate Esterase AT4G02330 56.846 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02656 K01051 - gmx:100786124 814.683