Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02654 ATGGCCTTCATGATTCTCCTCTTATTCCTTCCTTCATTGGCTTCTGCAGAATCTCTTTCTCCTGCAACTCTGTGCCACCTTACACCTGAACCTCCTTACTGCACATCCCTTCTTCCTCCCCAAAACACCACCATCCATGACTCTTGTCGCTTCTCTCTCCTCCATTCCTTATTGCGGGCCCGCAAATTCTTGAACTCCCTCGACCTGCTTCTCCAACGCCGCTCTTCTTTGTCCGCCGTGGTCGTCGCTGACCTTGAAGATTGCTGGACACTTGCCGACCTCAACGTAGATTTTCTCTCAACTTCCTTGCGAATCCTGAAATATGCTGCTGGGTTTCTATCCAATATCGAAGTTGAAAGTGTTCAAACCATGCTCAGTGCTGTTTTAACCAACCATGAAACTTGTTTGGATGGCCTTCAAGACACTGCTGCTTCTTCTCATCGGGGCCTGGTAACAGGAGGGCTGTTTCTCCCACTTTTTGATGACAAGAAGCTTTATAAAGTCTCTTTATCCCTTTTCACGAAGGGTTGGGTCCACACAAGTAAACAGAAGCCTCAATTATCGTGGCACCAACCTCCCCGAATGCAAGTTGTATTCAAAAACGGTCATTCGCCTCTTGCCATGTCGAGCAGAACTCGTGCTATCTTCGAGTCTGCTAGTGGTAGAAAATTAAACTCAGCTTTTGCAGCTCCCCATATGGCACTTGTGAAAGACATTGTGACGGTGAGTAAAGATGGAAGAGGCAACTTCACCACCATCAATGATGCCCTCTCTGCAGCTCCCAACAAAAGTTCCTCTTCCAAAGGCTACTTTTTGATCTATGTTGCAGCTGGAGTTTACGAAGAATACGTCTCCATTGATAAGAAAAAAACCAACTTGATGATGATTGGTGATGGTATCAACAGGACTATCATTTCAGGCAATCGCAGCCATGGAGATGGGTGCCAAACCTTCAGATCTGCAACATTTGTTGTACACGGGAAGGGATTCGTGGGAGTGAATATAACATTCCGTAACACAGCAGGGCCGGAGAAGTACCAAGCGGTGGCAGTGAGAAACTCAGCAAACTTGTCTGTATTTTATAGCTGCAGTTTTGAGGGATACCAAGATACACTCTACGCACATTCCATGAAGCAGTTTTACAGAGATTGTGATATATACGGCACGGTGGATTTCATATGCGGGAATGCGGCAGCGGTGTTTCAGAACTGCAACATTTATGTTCGTAAGCCCATGATGAAACAATTCAATTCCATCACAGCACAAAGTCGAGATAGCCACGATCAAAGTACGGGCTTCTCAATACATAACTGCACAATTAGAGCGGCGGAGGATCTGACGGGGATAAAGACGTACCTAGGAAGGCCGTGGAAGCCATTTTCGAGAACAGTTTACATGGAGAGCTTCATGAATAGCATCATAGATAGTGCTGGTTGGCATGTATGGGAGAATGATAAAGAGAATCGCTTGAACAACTTGTATTACGCAGAATATAATAATTTGGGGCCGGGCTCCAACACCTCACATCGAGTCCTGTGGAAAGGTTATCATGTCATCAACTATTCAATTGCTGTTAATTTCACCATCTCCAAGTTCTTATCAGGTAATGATTGGTTGCCCCGCACTGGCGTCCCCTACAATAGTCACCTAATCAACTTATGA 1662 0.4555 MAFMILLLFLPSLASAESLSPATLCHLTPEPPYCTSLLPPQNTTIHDSCRFSLLHSLLRARKFLNSLDLLLQRRSSLSAVVVADLEDCWTLADLNVDFLSTSLRILKYAAGFLSNIEVESVQTMLSAVLTNHETCLDGLQDTAASSHRGLVTGGLFLPLFDDKKLYKVSLSLFTKGWVHTSKQKPQLSWHQPPRMQVVFKNGHSPLAMSSRTRAIFESASGRKLNSAFAAPHMALVKDIVTVSKDGRGNFTTINDALSAAPNKSSSSKGYFLIYVAAGVYEEYVSIDKKKTNLMMIGDGINRTIISGNRSHGDGCQTFRSATFVVHGKGFVGVNITFRNTAGPEKYQAVAVRNSANLSVFYSCSFEGYQDTLYAHSMKQFYRDCDIYGTVDFICGNAAAVFQNCNIYVRKPMMKQFNSITAQSRDSHDQSTGFSIHNCTIRAAEDLTGIKTYLGRPWKPFSRTVYMESFMNSIIDSAGWHVWENDKENRLNNLYYAEYNNLGPGSNTSHRVLWKGYHVINYSIAVNFTISKFLSGNDWLPRTGVPYNSHLINL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02654 553 FunFam Pectinesterase 233 550 - -
Accr5g02654 553 Pfam Plant invertase/pectin methylesterase inhibitor 22 148 IPR006501 GO:0004857
Accr5g02654 553 SMART PMEI_2 16 172 IPR006501 GO:0004857
Accr5g02654 553 Gene3D - 234 550 IPR012334 -
Accr5g02654 553 PANTHER PECTINESTERASE 12 540 - -
Accr5g02654 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 172 IPR035513 -
Accr5g02654 553 Pfam Pectinesterase 240 536 IPR000070 GO:0030599|GO:0042545
Accr5g02654 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 175 IPR035513 -
Accr5g02654 553 CDD PMEI-like_3 23 177 - -
Accr5g02654 553 SUPERFAMILY Pectin lyase-like 235 547 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02654 Accr-Chr5 52629551 52631307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02654 3 552 Carbohydrate Esterase AT1G02810 51.742 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02654 K01051 - gmx:100790729 635.18