Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02653 ATGACCTCTAATATTATTGTGTTAACAATGGCCTTCATGATTCTCCTCTTATTCCTTCCTTCATTGGCTTCTGCAGAATCTCTTTCTCCTGCAACTCTGTGCCACCTTACACCTGAACCTCCTTACTGCACATCCCTTCTTCCTCCCCAAAACACCACCATCCATGACTCTTGTCGCTTCTCTCTCCTCCATTCCTTATTGCGGGCCCGCAAATTCTTGAACTCCCTCGACCTGCTTCTCCAACGCCGCTCTTCTTTGTCCGCCGTGGTCGTCGCTGACCTTGAAGATTGCTGGACACTTGCCGACCTCAACGTAGATTTTCTCTCAACTTCCTTGCGAATCCTGAAATATGCTGCTGGGTTTCTATCCAATATCGAAGTTGAAAGTGTTCAAACCATGCTCAGTGCTGTTTTAACCAACCATGAAACTTGTTTGGATGGCCTTCAAGACACTGCTGCTTCTTCTCATCGGGGCCTGGTAACAGGAGGGCTGTTTCTCCCACTTTTTGATGACAAGAAGCTTTATAAAGTCTCTTTATCCCTTTTCACGAAGGGTTGGGTCCACACAAGTAAACAGAAGCCTCAATTATCGTGGCACCAACCTCCCCGAATGCAAGTTGTATTCAAAAACGGTCATTCGCCTCTTGCCATGTCGAGCAGAACTCGTGCTATCTTCGAGTCTGCTAGTGGTAGAAAATTAAACTCAGCTTTTGCAGCTCCCCATATGGCACTTGTGAAAGACATTGTGACGGTGAGTAAAGATGGAAGAGGCAACTTCACCACCATCAATGATGCCCTCTCTGCAGCTCCCAACAAAAGTTCCTCTTCCAAAGGCTACTTTTTGATCTATGTTGCAGCTGGAGTTTACGAAGAATACGTCTCCATTGATAAGAAAAAAACCAACTTGATGATGATTGGTGATGGTATCAACAGGACTATCATTTCAGGCAATCGCAGCCATGGAGATGGGTGCCAAACCTTCAGATCTGCAACATTTGTTGTACACGGGAAGGGATTCGTGGGAGTGAATATAACATTCCGTAACACAGCAGGGCCGGAGAAGTACCAAGCGGTGGCAGTGAGAAACTCAGCAAACTTGTCTGTATTTTATAGCTGCAGTTTTGAGGGATACCAAGATACACTCTACGCACATTCCATGAAGCAGTTTTACAGAGATTGTGATATATACGGCACGGTGGATTTCATATGCGGGAATGCGGCAGCGGTGTTTCAGAACTGCAACATTTATGTTCGTAAGCCCATGATGAAACAATTCAATTCCATCACAGCACAAAGTCGAGATAGCCACGATCAAAGTACGGGCTTCTCAATACATAACTGCACAATTAGAGCGGCGGAGGATCTGACGGGGATAAAGACGTACCTAGGAAGGCCGTGGAAGCCATTTTCGAGAACAGTTTACATGGAGAGCTTCATGAATAGCATCATAGATAGTGCTGGTTGGCATGTATGGGAGAATGATAAAGAGAATCGCTTGAACAACTTGTATTACGCAGAATATAATAATTTGGGGCCGGGCTCCAACACCTCACATCGAGTCCTGTGGAAAGGTTATCATGTCATCAACTATTCAATTGCTGTTAATTTCACCATCTCCAAGTTCTTATCAGGTAATGATTGGTTGCCCCGCACTGGCGTCCCCTACAATAGTCACCTAATCAACTTATGA 1689 0.4523 MTSNIIVLTMAFMILLLFLPSLASAESLSPATLCHLTPEPPYCTSLLPPQNTTIHDSCRFSLLHSLLRARKFLNSLDLLLQRRSSLSAVVVADLEDCWTLADLNVDFLSTSLRILKYAAGFLSNIEVESVQTMLSAVLTNHETCLDGLQDTAASSHRGLVTGGLFLPLFDDKKLYKVSLSLFTKGWVHTSKQKPQLSWHQPPRMQVVFKNGHSPLAMSSRTRAIFESASGRKLNSAFAAPHMALVKDIVTVSKDGRGNFTTINDALSAAPNKSSSSKGYFLIYVAAGVYEEYVSIDKKKTNLMMIGDGINRTIISGNRSHGDGCQTFRSATFVVHGKGFVGVNITFRNTAGPEKYQAVAVRNSANLSVFYSCSFEGYQDTLYAHSMKQFYRDCDIYGTVDFICGNAAAVFQNCNIYVRKPMMKQFNSITAQSRDSHDQSTGFSIHNCTIRAAEDLTGIKTYLGRPWKPFSRTVYMESFMNSIIDSAGWHVWENDKENRLNNLYYAEYNNLGPGSNTSHRVLWKGYHVINYSIAVNFTISKFLSGNDWLPRTGVPYNSHLINL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02653 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 181 IPR035513 -
Accr5g02653 562 PANTHER PECTINESTERASE 15 549 - -
Accr5g02653 562 CDD PMEI-like_3 32 186 - -
Accr5g02653 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 184 IPR035513 -
Accr5g02653 562 SUPERFAMILY Pectin lyase-like 244 556 IPR011050 -
Accr5g02653 562 FunFam Pectinesterase 242 559 - -
Accr5g02653 562 NCBIfam pectinesterase inhibitor domain 5 152 IPR006501 GO:0004857
Accr5g02653 562 SMART PMEI_2 25 181 IPR006501 GO:0004857
Accr5g02653 562 Gene3D - 243 559 IPR012334 -
Accr5g02653 562 Pfam Pectinesterase 249 545 IPR000070 GO:0030599|GO:0042545
Accr5g02653 562 Pfam Plant invertase/pectin methylesterase inhibitor 31 157 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02653 Accr-Chr5 52629551 52631334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02653 1 561 Carbohydrate Esterase AT1G02810 51.453 0.0 582