Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02642 ATGATCAGAATATCATCATGTCTCGTGTTTGTTCTGCTAGTGTTCTTGCTTCCTTGTTCCCTGACAAGTACAGGTCATTTGGTGTCAGCAAAAGGGAACACTTATGTCAGAGACGCATGCTCGGTGACTATGTATCAAGACCTGTGCATCCACTCGCTGGCATCGTTTTCCAACGCGGCAAGAAGGAGCCCAAGCAGGTGGGCCCGAGCAGGAGTGTCGGTGACAATAACCGAGGTTAAGAATGTTCAAGCACATCTTGCCAGGCTGAAGAGATACCGTCGCCTGAGAGGAAGAAACAGAGCTGCTCTCTCAGATTGTATCGAAACTTTTGCAGATGCGCTTGGTGAGCTTCACAGATCACTTGGTGTGCTCAGGAAGCTAAGCAGAAACACGTTTAGTGACCAGATGGATGATCTCAATACATGGATAAGTGCAGCTCTCACTGATGAAGATACTTGTCTTGATGGGTTTGAAGGCCAAAAGCAGAGGCAGATTAAATCGCTGCAGGATCAGGTTCAGAACGTCTCTTATATAACCAGTAACGCTCTTGCTCTTGTCAACAAACTTGCCACTACAGGTCTGGATAGCATCACTGATCCATAG 603 0.471 MIRISSCLVFVLLVFLLPCSLTSTGHLVSAKGNTYVRDACSVTMYQDLCIHSLASFSNAARRSPSRWARAGVSVTITEVKNVQAHLARLKRYRRLRGRNRAALSDCIETFADALGELHRSLGVLRKLSRNTFSDQMDDLNTWISAALTDEDTCLDGFEGQKQRQIKSLQDQVQNVSYITSNALALVNKLATTGLDSITDP 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02642 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 191 IPR035513 -
Accr5g02642 200 CDD PMEI-like_3 39 191 - -
Accr5g02642 200 NCBIfam pectinesterase inhibitor domain 8 189 IPR006501 GO:0004857
Accr5g02642 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 185 - -
Accr5g02642 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 189 IPR035513 -
Accr5g02642 200 FunFam Pectinesterase inhibitor 3 31 190 - -
Accr5g02642 200 SMART PMEI_2 31 185 IPR006501 GO:0004857
Accr5g02642 200 Pfam Plant invertase/pectin methylesterase inhibitor 35 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02642 Accr-Chr5 52567986 52568588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02642 28 192 Carbohydrate Esterase AT3G14310 32.941 5.59e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02642 - - qsu:112006490 242.662