Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02624 ATGCTTCTCCAGAATCGACATCTGTCCTTGTGCGGTTCTCAATTCACTGTTGGTTGTGGCCGTCAATGCAATTTATGGCTTAATGATCCAGCTGTTAGTAATGTTTTGTGCAAGTTGAAGCTCACCAAGCGTGGGGCTTCATCTGTTGGATTACTGGAAATAACAGGGGATAAAGGTGCCGTACAAGTTAATGGCTGGAATTATCGAAAAAATTGCCGGCTGATATTGAATGCAGGTGATGAGGTGGTCTTCATTTCTGACAAGAAGAATGTGTTAGAATATTATGCTTATATTTTTCAGCAGCTTACGAATAACGTCACTGCTGCTGGGACACCTTGTTCTAATGATGAGGTTTCATCACAATCTGGCCATGGGGATGATACTACTGACAGGAAGGACACCACCAATAATGGCAATTCAGCTGAAGTTTCTGCTGAGAAAACTATTCTTGCACCCTCCGCCACTGCCAATGAAAATTTTAATCTTGACAGCATGAAAGTGGATGTTGGGAGGTTGACAGGGGCCACTCACGAGTTAAGGCCTTTGTCGTGTATGGTTGCTGGCCTTCGTTTAAAGGATATTGATCCTCAAGCCGGTTTAGTTTCCATCGGGCAGCAAGCATTCAAAAAAAATCCACAGCAAGGAATTCTCAATCCTGATGATATTGAGGTGTCATTTGAACACTTCCCATATTATATAAGTGATTCTACAAAAAGTGTTTTGGCTACTTCTATGTACATTCATTTGAAGCGAAATGATTTTATAAAGTTTTCTTCAGGCCTACCTTCACTGTGCCCCCGAATATTGTTATCTGGTCCTGCAGGTTCGGAAATATATCAGGAAACCTTGTGCAAGGCTCTTGCAAAACATTTTGGTGCTAGGCTACTAATTGTGGATTCTTTTACCCTGCCTGGTGGAACACCATCAAAGGATTCTGATTGTCCTAAACAAAGTTCAAGGCCTGAAAAAGCGAATGCAAAACAGAGTGCCCAGCTTGCCACATTACAGCATAAAAAACCAACTTCAAGTATCAATGCTGATCTTATTGATGAATCCTCATTAAGTTCTCAGGTTATGCTGAAGCCGGAGGTATCTACTGCATCGTCCAAAGGCCCTATGATTAAAAAAGGTGACCGAGTAAAATTTGTTGGCAAACTTCTTCCCTCTGTAGTCTCTTTATTACAAAATTGTCCTTCAAGGGTACCTACGTATGACTCCCAGGGAACAGTTCTTCTTGCTTTTGAAGAAAACAAGTCTTCAAAAATTGGTGTTAGATTCGATAAACCAATTCCAGATGGAAATGATCTTGGAGGCCTATGTGAAGATGATCGTGGTTTTTTTTGTTCTGCTTACCATTTACTACGAGTGGATAAACCTGGAGGGGATGAAACTATCAAGCTTGCCATTAACGAAATCTTTGAGGTTGTTTTTTCCCAGAGTAAAAGTGGTGGGTTGGTGTTGTTCTTGAAAGATATAGAGAAGGCTATGATTGGGAACTCAGAAGTCTTAAAAAGCAGACTTGAAAGTTTGCCACAAAATGTAGTTGTACTTGGTTCACATACTCAGCTGGGCAATCACGAGGACAAGACCCAGCCTGGTAGCCTTCCAGTTACAGAATTTGGGATCGATCAGGCAGCTTTATTTGATCTTGGTCTTCTGGATAACCTTAGTGGATTGCATGATAGGAGCAAGGAACCCACCAAAACGATGAAGCAACTTAGACTCCTTTTTCCCAACGAAATATCAATACAGCCGCCTCAGGATGAGGCTTTGCTCTCTCATTGGAAGCAGCAGTTAGAACATGACATTGAAACTATGAAAGCTCAGTCAAATATTGTCTGCATTCGCACAGTTCTTGACAAGATTGGAATTATTTGCCCTGATCTTGAAAATCTTTGTATTAAAGATCAAGCCTTAACAACTGCAGTTGTGGGGAAAATTGTTGGTTGGGCATTAAGTTACCAGCTAATGCATTCATCTGAAGACTCAATCAAAGACTCTAAGATTATGTTGTCCACTGAAAGCATTAAGTATGGGCTGAACATTCTACAGGGCATCCGAGGAGAAAGCAAGAACTTAAAGAAATCACTGAAGGACGTGATCACTGATAATGAATTTGAGAAAAAATTGCTTGCTGATGTTATTCCTCCAAGTGACATTGGGGTCAAGTTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGATTGAACTGGTCATGCTTCCCCTTCAGAGGCCTGAATTGTTTTCCAAAGGACAGTTGACAAAGGCTTGCAAGGGAGTATTGCTGTTTGGGCCCCCTGGTGTTGGAAAAACAATGCTTGCAAAGGCTGTAGCTACTGAGGCTGGAGCAAATTTCATCAACGTCTCAGTGTCCAGCATTACCTCGAAGTGGCATGGTGAAGCAGAGAAATATGTCAAAGCAGTATTTTCTCTAGCAAGCAAAATTGCTCCTAGTGTTATTTTTGTTGATGAGGTTGATAGTTTGTTACGAAGACGTGAAAATCATGGTGAGCATGAGGCTATGCGTGACATTAAGAATGAATTTATGGTGAATTGGGATGGTCTGCGAACAAAAGACAATGAGCGCATACTTGTACTTGCTGCCACAAATAGACCCTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTGATGGTCAATTTGCCAGATGCTTCAAACAGAGTAATAATTCTTGAAGTGATTTTAGCAAAAGAAGATTTGGCAGCTGATGTCGATCTGGAAGCAATATCAAACATGACTGATGGATATTCTGGGAGTGACCTTAAGAATCTGTGTGTCACAGCAGCTTACTGCCCAATGAGAGAGATATTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCTTTGGCTGAGAACAGACCTTTACCTCCATTGTATGGCAGTACTGACGTTCGGCCCTTAAAGATGGAGGATTTTAGACATGCACATGAGCAGGTGGGCGCAAGCGTGTTGTCGGAGTCAAGAAATATGAACGAGCTGCTCCAATGGAATGAGCTTTACGGGGAAGGTGGATCCAGAAGATTTACAACTCCGAGCTATTTTATGTAA 3084 0.416 MLLQNRHLSLCGSQFTVGCGRQCNLWLNDPAVSNVLCKLKLTKRGASSVGLLEITGDKGAVQVNGWNYRKNCRLILNAGDEVVFISDKKNVLEYYAYIFQQLTNNVTAAGTPCSNDEVSSQSGHGDDTTDRKDTTNNGNSAEVSAEKTILAPSATANENFNLDSMKVDVGRLTGATHELRPLSCMVAGLRLKDIDPQAGLVSIGQQAFKKNPQQGILNPDDIEVSFEHFPYYISDSTKSVLATSMYIHLKRNDFIKFSSGLPSLCPRILLSGPAGSEIYQETLCKALAKHFGARLLIVDSFTLPGGTPSKDSDCPKQSSRPEKANAKQSAQLATLQHKKPTSSINADLIDESSLSSQVMLKPEVSTASSKGPMIKKGDRVKFVGKLLPSVVSLLQNCPSRVPTYDSQGTVLLAFEENKSSKIGVRFDKPIPDGNDLGGLCEDDRGFFCSAYHLLRVDKPGGDETIKLAINEIFEVVFSQSKSGGLVLFLKDIEKAMIGNSEVLKSRLESLPQNVVVLGSHTQLGNHEDKTQPGSLPVTEFGIDQAALFDLGLLDNLSGLHDRSKEPTKTMKQLRLLFPNEISIQPPQDEALLSHWKQQLEHDIETMKAQSNIVCIRTVLDKIGIICPDLENLCIKDQALTTAVVGKIVGWALSYQLMHSSEDSIKDSKIMLSTESIKYGLNILQGIRGESKNLKKSLKDVITDNEFEKKLLADVIPPSDIGVKFDDIGALENVKDTLIELVMLPLQRPELFSKGQLTKACKGVLLFGPPGVGKTMLAKAVATEAGANFINVSVSSITSKWHGEAEKYVKAVFSLASKIAPSVIFVDEVDSLLRRRENHGEHEAMRDIKNEFMVNWDGLRTKDNERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDASNRVIILEVILAKEDLAADVDLEAISNMTDGYSGSDLKNLCVTAAYCPMREILEKEKKERSLALAENRPLPPLYGSTDVRPLKMEDFRHAHEQVGASVLSESRNMNELLQWNELYGEGGSRRFTTPSYFM 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02624 1027 MobiDBLite consensus disorder prediction 134 148 - -
Accr5g02624 1027 Gene3D - 3 107 - -
Accr5g02624 1027 MobiDBLite consensus disorder prediction 307 330 - -
Accr5g02624 1027 Gene3D - 721 999 IPR027417 -
Accr5g02624 1027 Gene3D - 895 989 - -
Accr5g02624 1027 Pfam ATPase family associated with various cellular activities (AAA) 763 892 IPR003959 GO:0005524|GO:0016887
Accr5g02624 1027 Gene3D - 359 466 IPR047008 -
Accr5g02624 1027 SMART AAA_5 759 896 IPR003593 GO:0016887
Accr5g02624 1027 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 721 897 - -
Accr5g02624 1027 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Accr5g02624 1027 ProSitePatterns AAA-protein family signature. 866 885 IPR003960 GO:0005524|GO:0016887
Accr5g02624 1027 Pfam AAA+ lid domain 916 951 IPR041569 -
Accr5g02624 1027 MobiDBLite consensus disorder prediction 112 148 - -
Accr5g02624 1027 SUPERFAMILY SMAD/FHA domain 6 93 IPR008984 GO:0005515
Accr5g02624 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 722 995 IPR027417 -
Accr5g02624 1027 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 206 1026 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02624 Accr-Chr5 52443229 52454760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02624 758 963 Calmodulin-binding Proteins AT3G56690 35.238 3.31e-30 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02624 - - gmx:106794125 1310.43