Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02611 ATGAAGGGGAAGAGCTGTGGGAGGAGGACCAGCAATAGAAGACGAAGTGTGAGTAAGGATGCGACAAAAATGAAGGGAACACTAGCTAGGCACTTGCCGAATCAGCTAGGGCAAGTATCCCTCTTTCCCTTTCACCAACAGTCATCATCTTCCGCCGTCCCTCGCTTCCAGAACCTTCTTGAAGCCGAAGCCCGTGACAGCAATCTCCCCTCATCTTCTCCTCTCGCTCTGGATCATATGGTTGACAACAATGTGGACGACAAAGATTTCATTCTCAGCCAAGATTTCTTCTGCACTCCAGATTACATAACCCCGGATAATCAGTATATTTTTAATGGCTTGGACTGCAACAAGGAGAATATCCCATGTCCCAAGTCACCGGAAAAACTAAATACTACAAAAAGCAAGAGATGCCGATTGGATGGCATCTCAGGGAATCCTCTTAGCCCTACTTTATCTGGTGGTCATCAAGCTGTGGAGCTTGGAACTGAGTCTGCAGCAGATGAAGAAGATATTGAGAAACTGATTTCCACTGGCAAACCAAAGGCTCAAAATTATCTCTCACATTCTGTGGTTGCCTTGCGCTCTAGGGTCATACCCCCTCCTTGCATTAGGAACCCATATTTGAAAGATGCTTTAGATAAGGGCAAAGATCCCTATGGGAACCAAAGATCAAAATATGCAGGTCTGTTCCCTTCAATTACTGGCAGTGATGGGCTTTCACGCTATCGCACTGACTTCCATGAGATTGAGCAAATTGGTATAGGAAACTTTAGTAACGTTTTCAAAGTTTTAAAGAGAATAGACGGTTGCTTGTATGCTGTGAAACACAGTACAAGACAGTTGTCCCAGGAAACAGAAAGGAGAAAAGCTTTGATGGAAGTTCAAGCACTGGCTGCCTTAGGATCCTATGAAAACATAGTAGGGTACTATTCTTCATGGTTTGAAAATGAGTGGCTGTACATTCAGATGGAGTTATGTGATCGGAGCTTATCCATAAACAAGGCCAATACAATGTTTACGGAAGGCCAAGTTTTAGAAGTACTGCATCAGGTTGCAAAGGCACTGTTGTTTATACATGAAAGAGGAATAGCTCATCTTGATGTTAAACCTGATAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGCTGTGCAACTCTCATTGATAAGAGCCTGCCAATTGAAGAGGGTGATGCACGTTATATGCCCCAGGAAATCCTGAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTTTCTTTGGGAGCTTCTATTTTTGAGCTCATTCGAGGATCACCTTTGCCAGAATCAGGATGTAAATCTTTTAATCTGAAAGAAGGCAGGTTGCCACTCCTGCCTGGCCATTCGCTGCAATTTCAGAACTTGCTCAAGGTCATGATGGACCCTGATCCAGTTAAACGACCCAGTGCAAGAGAGTTAGTGGAGAACCCAATCTTTGATTGGGCCCTGAGAAAGTAA 1494 0.4331 MKGKSCGRRTSNRRRSVSKDATKMKGTLARHLPNQLGQVSLFPFHQQSSSSAVPRFQNLLEAEARDSNLPSSSPLALDHMVDNNVDDKDFILSQDFFCTPDYITPDNQYIFNGLDCNKENIPCPKSPEKLNTTKSKRCRLDGISGNPLSPTLSGGHQAVELGTESAADEEDIEKLISTGKPKAQNYLSHSVVALRSRVIPPPCIRNPYLKDALDKGKDPYGNQRSKYAGLFPSITGSDGLSRYRTDFHEIEQIGIGNFSNVFKVLKRIDGCLYAVKHSTRQLSQETERRKALMEVQALAALGSYENIVGYYSSWFENEWLYIQMELCDRSLSINKANTMFTEGQVLEVLHQVAKALLFIHERGIAHLDVKPDNIYVKNGVYKLGDFGCATLIDKSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIFELIRGSPLPESGCKSFNLKEGRLPLLPGHSLQFQNLLKVMMDPDPVKRPSARELVENPIFDWALRK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02611 497 FunFam Wee1-like protein kinase 326 495 - -
Accr5g02611 497 ProSitePatterns Protein kinases ATP-binding region signature. 253 276 IPR017441 GO:0005524
Accr5g02611 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Accr5g02611 497 SUPERFAMILY Protein kinase-like (PK-like) 240 492 IPR011009 -
Accr5g02611 497 Pfam Protein kinase domain 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02611 497 Gene3D Phosphorylase Kinase; domain 1 237 326 - -
Accr5g02611 497 Gene3D Transferase(Phosphotransferase) domain 1 327 494 - -
Accr5g02611 497 ProSiteProfiles Protein kinase domain profile. 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02611 497 MobiDBLite consensus disorder prediction 1 24 - -
Accr5g02611 497 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 91 489 - -
Accr5g02611 497 SMART serkin_6 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02611 497 FunFam WEE protein kinase 237 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02611 Accr-Chr5 52373284 52376830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02611 17 492 Core Cell Cycle Gene Families AT1G02970 59.667 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Accr5g02611 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02611 K06632 - qsa:O6P43_007140 732.25