Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02605 ATGGAGGTCTCGAAAGACGAATTTTCGGAGCTAGAGATTGGGAATTCAGTGGAGTCGTTCCAGAAATTTCTGGGTTCGCAAAGGGAACTCTTTCATAGCCAGATCGATCAGCTTCAGAAAATTGTCGTCACGCAATGCAAACTCACTGGTGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGCGCTCTGTCAATAAAAATTGGCAAAAGACCCAGGGATTTGTTAAATCCAAAAGCTGTAAACTACATGCAATTAATATTCTCCATTAAAGATGCAATCAGTAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGCGTCACAGTTACACAGGTCCGTGAATTTTTCAATATTCAACGTTCAAGAGTGAGAAGACAAGTTCGGTTGTCAAGGGAAAGGGTGTTAAGATCCAACTACCATGAAGAACCTTGTGACGGGTTCCCAATAAACTTGGATCCTATGATAACGATTAATCCAGCTCCCTTAAACTCTGCCAGTCCCGTCAGCGTAGATGAAGCTTCTTGTTCAACAGAGGAGACTCCATTTTCTGGCCTAAATGGCTTAGAGAAACATTTTGTTGATAATATTTTTAGTTTAATGCGGAAAGAGGAAACATTCTCAGGCCAGGTTAAATTGTTGGAGTGGATATTGAAGATACAGAATGCTTCAGTACTAATTTGGTTTTTAGGCAGTGGAGGTGTGATGATTTTAGCAGCTTGGTTGAATGAAGCTGCTGTTGAAGAGCAAACTAGTGTTCTTCTTCTTATTTTAAAGGTCCTTTGTCATTTGCCACTACATAAAGCCCTTCCTACGCATATTTCAGCTATATTGCAGTGTGTTAATAGGCTTCGGTTTCACAGAACATCAGACATATCAAACAGGGCACGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCGAAGAACCAAGCAATAAAGAAAACCACTGGGTTTAAACCTGGTAGCGAGGTTCAAAAGGAGATGGCTGGACAGAGGGTTTGTCAAATTATGGGCACTGAATCATGGAATTCAAATGTCAATATTCCTGAGGACATTCTGGCCCTTTCAAATGAAGGTTCATATGATTTCAGGAAATCAGAAGCTCCACAAACTGTGAAATTATTGACAGCTTCTTCAGATGATTATACTAAGAAGTCTGTCCTAGGTTTATCACTGTCTCAGACTAGGGAACGCAGAAAAGTGCAGTTAGTGGAGCAGCCAGGTCAAAAGACAGTAAGCAGAAGTCCTCAAGCTGCGAGAGTAGGGCCTGTAAGTAAGGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTGTTTATGCAAAGCAAATATGGGAAACCTGGTTCATCTAAAGGAAGTAAAGAAGCAAAGACTGATGGTCTGAATAAACCTCAGACAAATCAGGTTGGTCTTGGGGCTTCCTTATCTAAAATTCCTGTATCAACCAAAACTGATGAAGACAGTAAGCCTTTCTTGCTTCCTTCTAAAACTCCTAATACGAAGGATGCTTCTTCTGAATCATATTCGAGACTGGATTTGAAGGAACCTTTCTGGGAGAAGTGCAACCAGGTGCAAATCCCATGGAAGATACCAGCAGAAGTGAAACTTCACGATACATGGAGAGTTGGTACTGGCGAAAACAGCAAAGAGGTTGATGTTCAGAAAAGTAGAAATCGGAGGGGGGAGGAGATAATTTTTCGGACTATCCAGGAGATACCTCTTAATCCTAATGAACCATGGGACCTGGAAATGGACTATGATGACACACTAACCCCACCAATTCCCATTGAACAGCTTCCTGATGTTGACGGTACAGAAACACTAGCTGCCGCTAATGAAGGTATTCAAGGGGCGACCCCTTCATCTTCCAACGCTAATGCAAATGTTGCTGAGCCTGATCTGGAGCTGCTTGCTGTACTTCTTAAAAATCCTGAGTTGGTGTTTGCATTGACTTCTGGACAAGCTGGGAGCATACCGAGTGAGGAAACAGTAAAACTGCTTGACATGATAAAAAAAGGTAGTGTCCATTTGGCTGACAATACAAATGGCAGCATTGGTGGAAAGGCGCAGGAGAAGGTGGAAGTTTCTCTTCCTTCTCCGACTCCTTCTAACGATCCAAGAACGAGTGGGTGGACGACAGAAGGTTCAAAGAATCCCTTTTCACGCCACAACTCGATGGCTGACAGAAGTATCAACCTTCCAGCTGCTGCAGCCCACATGGTATTGCCTCAGGTTCCTGCAGCCCCTGGCATCGCAGTACGACAACATCAAACTGATTCACTGTCTCAAGCACCCGATGTTGTTTCTGCTCTTTCCTCTGTGCTTCCAACTCTGCTTACAAATTCTTCTCCAACAACACAAATGCTCTCATCGAACATGGGTTTAAGTACCATGATGAACGACATAATCCCTGCAACAAATGCATCGTGTGTTAACTCACCTTTTGCAATGCGGGTAGATAGCACCAGTATTAGTAGTAATGTAAAACCAATTGCTAATTTGAGAATACAAGAGGGATTGTCTAATTCACATCTGCAATCTTATGAGCTGCCATCACCAACGCCAGCACCAGCACCAGCACCAACACTATCCAGTTCAGTCACACCACCACAAAGGCGTGCCCTTTTATTGCAACGGCCCCATTTTTATGATCCATCCTCTCACAACTCTCTACATTCCTACCCTCCTCCTCCTATGGAAAAACAAGGCCATGTTTCTGAGTCTTGGAGAGTTAGGCAGGACATATCCTCCAGCTATCATTCTCAAGTAAATCAAAACACTTATAGTGCATCGGTTGAAAGATCCGAGCGATCTGATTCTTCTTGGGAGAGAAATGATTATGGAGGAGGAGGAGGAGGATTTGAATCATGGAGTCCAGATAATAGTCCGAGTAGAAATAATGGATTTATTAGGGGAAGGAATTTCCCTGATTCCAGATTGAACCCTGAGAGGAACTATAGGCCTGAATGGTCAAGGCATCGGGGTTCTGCTGGTTACTGGGATCCTAGTAGACAAGGAAGCAGGAAGTGGCATGATCAGAGGCGATGA 3063 0.4323 MEVSKDEFSELEIGNSVESFQKFLGSQRELFHSQIDQLQKIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQLIFSIKDAISKKESREISALFGVTVTQVREFFNIQRSRVRRQVRLSRERVLRSNYHEEPCDGFPINLDPMITINPAPLNSASPVSVDEASCSTEETPFSGLNGLEKHFVDNIFSLMRKEETFSGQVKLLEWILKIQNASVLIWFLGSGGVMILAAWLNEAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILQCVNRLRFHRTSDISNRARVLLSKWSKLLAKNQAIKKTTGFKPGSEVQKEMAGQRVCQIMGTESWNSNVNIPEDILALSNEGSYDFRKSEAPQTVKLLTASSDDYTKKSVLGLSLSQTRERRKVQLVEQPGQKTVSRSPQAARVGPVSKGRPMSADDIQKAKMRALFMQSKYGKPGSSKGSKEAKTDGLNKPQTNQVGLGASLSKIPVSTKTDEDSKPFLLPSKTPNTKDASSESYSRLDLKEPFWEKCNQVQIPWKIPAEVKLHDTWRVGTGENSKEVDVQKSRNRRGEEIIFRTIQEIPLNPNEPWDLEMDYDDTLTPPIPIEQLPDVDGTETLAAANEGIQGATPSSSNANANVAEPDLELLAVLLKNPELVFALTSGQAGSIPSEETVKLLDMIKKGSVHLADNTNGSIGGKAQEKVEVSLPSPTPSNDPRTSGWTTEGSKNPFSRHNSMADRSINLPAAAAHMVLPQVPAAPGIAVRQHQTDSLSQAPDVVSALSSVLPTLLTNSSPTTQMLSSNMGLSTMMNDIIPATNASCVNSPFAMRVDSTSISSNVKPIANLRIQEGLSNSHLQSYELPSPTPAPAPAPTLSSSVTPPQRRALLLQRPHFYDPSSHNSLHSYPPPPMEKQGHVSESWRVRQDISSSYHSQVNQNTYSASVERSERSDSSWERNDYGGGGGGFESWSPDNSPSRNNGFIRGRNFPDSRLNPERNYRPEWSRHRGSAGYWDPSRQGSRKWHDQRR 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02605 1020 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 229 315 IPR035441 -
Accr5g02605 1020 SMART HOX_1 68 130 IPR001356 GO:0003677
Accr5g02605 1020 MobiDBLite consensus disorder prediction 448 514 - -
Accr5g02605 1020 MobiDBLite consensus disorder prediction 962 976 - -
Accr5g02605 1020 MobiDBLite consensus disorder prediction 982 996 - -
Accr5g02605 1020 MobiDBLite consensus disorder prediction 464 486 - -
Accr5g02605 1020 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 999 - -
Accr5g02605 1020 MobiDBLite consensus disorder prediction 914 940 - -
Accr5g02605 1020 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 233 317 IPR035441 -
Accr5g02605 1020 MobiDBLite consensus disorder prediction 890 1020 - -
Accr5g02605 1020 MobiDBLite consensus disorder prediction 701 724 - -
Accr5g02605 1020 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Accr5g02605 1020 MobiDBLite consensus disorder prediction 850 874 - -
Accr5g02605 1020 MobiDBLite consensus disorder prediction 399 431 - -
Accr5g02605 1020 MobiDBLite consensus disorder prediction 685 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02605 Accr-Chr5 52317066 52326404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02605 466 732 Homeobox Transcription Factor Family AT4G02560 44.569 6.08e-52 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02605 - - adu:107492506 1124