Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02604 ATGATGGAGGTCTCGAAAGACGAATTTTCGGAGCTAGAGATTGGGAATTCAGTGGAGTCGTTCCAGAAATTTCTGGGTTCGCAAAGGGAACTCTTTCATAGCCAGATCGATCAGCTTCAGAAAATTGTCGTCACGCAATGCAAACTCACTGGTGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGCGCTCTGTCAATAAAAATTGGCAAAAGACCCAGGGATTTGTTAAATCCAAAAGCTGTAAACTACATGCAATTAATATTCTCCATTAAAGATGCAATCAGTAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGCGTCACAGTTACACAGGTCCGTGAATTTTTCAATATTCAACGTTCAAGAGTGAGAAGACAAGTTCGGTTGTCAAGGGAAAGGGTGTTAAGATCCAACTACCATGAAGAACCTTGTGACGGGTTCCCAATAAACTTGGATCCTATGATAACGATTAATCCAGCTCCCTTAAACTCTGCCAGTCCCGTCAGCGTAGATGAAGCTTCTTGTTCAACAGAGGAGACTCCATTTTCTGGCCTAAATGGCTTAGAGAAACATTTTGTTGATAATATTTTTAGTTTAATGCGGAAAGAGGAAACATTCTCAGGCCAGGTTAAATTGTTGGAGTGGATATTGAAGATACAGAATGCTTCAGTACTAATTTGGTTTTTAGGCAGTGGAGGTGTGATGATTTTAGCAGCTTGGTTGAATGAAGCTGCTGTTGAAGAGCAAACTAGTGTTCTTCTTCTTATTTTAAAGGTCCTTTGTCATTTGCCACTACATAAAGCCCTTCCTACGCATATTTCAGCTATATTGCAGTGTGTTAATAGGCTTCGGTTTCACAGAACATCAGACATATCAAACAGGGCACGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCGAAGAACCAAGCAATAAAGAAAACCACTGGGTTTAAACCTGGTAGCGAGGTTCAAAAGGAGATGGCTGGACAGAGGGTTTGTCAAATTATGGGCACTGAATCATGGAATTCAAATGTCAATATTCCTGAGGACATTCTGGCCCTTTCAAATGAAGGTTCATATGATTTCAGGAAATCAGAAGCTCCACAAACTGTGAAATTATTGACAGCTTCTTCAGATGATTATACTAAGAAGTCTGTCCTAGGTTTATCACTGTCTCAGACTAGGGAACGCAGAAAAGTGCAGTTAGTGGAGCAGCCAGGTCAAAAGACAGTAAGCAGAAGTCCTCAAGCTGCGAGAGTAGGGCCTGTAAGTAAGGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTGTTTATGCAAAGCAAATATGGGAAACCTGGTTCATCTAAAGGAAGTAAAGAAGCAAAGACTGATGGTCTGAATAAACCTCAGACAAATCAGGTTGGTCTTGGGGCTTCCTTATCTAAAATTCCTGTATCAACCAAAACTGATGAAGACAGTAAGCCTTTCTTGCTTCCTTCTAAAACTCCTAATACGAAGGATGCTTCTTCTGAATCATATTCGAGACTGGATTTGAAGGAACCTTTCTGGGAGAAGTGCAACCAGGTGCAAATCCCATGGAAGATACCAGCAGAAGTGAAACTTCACGATACATGGAGAGTTGGTACTGGCGAAAACAGCAAAGAGGTTGATGTTCAGAAAAGTAGAAATCGGAGGGGGGAGGAGATAATTTTTCGGACTATCCAGGAGATACCTCTTAATCCTAATGAACCATGGGACCTGGAAATGGACTATGATGACACACTAACCCCACCAATTCCCATTGAACAGCTTCCTGATGTTGACGGTACAGAAACACTAGCTGCCGCTAATGAAGGTATTCAAGGGGCGACCCCTTCATCTTCCAACGCTAATGCAAATGTTGCTGAGCCTGATCTGGAGCTGCTTGCTGTACTTCTTAAAAATCCTGAGTTGGTGTTTGCATTGACTTCTGGACAAGCTGGGAGCATACCGAGTGAGGAAACAGTAAAACTGCTTGACATGATAAAAAAAGGTAGTGTCCATTTGGCTGACAATACAAATGGCAGCATTGGTGGAAAGGCGCAGGAGAAGGTGGAAGTTTCTCTTCCTTCTCCGACTCCTTCTAACGATCCAAGAACGAGTGGGTGGACGACAGAAGGTTCAAAGAATCCCTTTTCACGCCACAACTCGATGGCTGACAGAAGTATCAACCTTCCAGCTGCTGCAGCCCACATGGTATTGCCTCAGGTTCCTGCAGCCCCTGGCATCGCAGTACGACAACATCAAACTGATTCACTGTCTCAAGCACCCGATGTTGTTTCTGCTCTTTCCTCTGTGCTTCCAACTCTGCTTACAAATTCTTCTCCAACAACACAAATGCTCTCATCGAACATGGGTTTAAGTACCATGATGAACGACATAATCCCTGCAACAAATGCATCGTGTGTTAACTCACCTTTTGCAATGCGGGTAGATAGCACCAGTATTAGTAGTAATGTAAAACCAATTGCTAATTTGAGAATACAAGAGGGATTGTCTAATTCACATCTGCAATCTTATGAGCTGCCATCACCAACGCCAGCACCAGCACCAGCACCAACACTATCCAGTTCAGTCACACCACCACAAAGGCGTGCCCTTTTATTGCAACGGCCCCATTTTTATGATCCATCCTCTCACAACTCTCTACATTCCTACCCTCCTCCTCCTATGGAAAAACAAGGCCATGTTTCTGAGTCTTGGAGAGTTAGGCAGGACATATCCTCCAGCTATCATTCTCAAGTAAATCAAAACACTTATAGTGCATCGGTTGAAAGATCCGAGCGATCTGATTCTTCTTGGGAGAGAAATGATTATGGAGGAGGAGGAGGAGGATTTGAATCATGGAGTCCAGATAATAGTCCGAGTAGAAATAATGGATTTATTAGGGGAAGGAATTTCCCTGATTCCAGATTGAACCCTGAGAGGAACTATAGGCCTGAATGGTCAAGGCATCGGGGTTCTGCTGGTTACTGGGATCCTAGTAGACAAGGAAGCAGGAAGTGGCATGATCAGAGGCGATGA 3066 0.4322 MMEVSKDEFSELEIGNSVESFQKFLGSQRELFHSQIDQLQKIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQLIFSIKDAISKKESREISALFGVTVTQVREFFNIQRSRVRRQVRLSRERVLRSNYHEEPCDGFPINLDPMITINPAPLNSASPVSVDEASCSTEETPFSGLNGLEKHFVDNIFSLMRKEETFSGQVKLLEWILKIQNASVLIWFLGSGGVMILAAWLNEAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILQCVNRLRFHRTSDISNRARVLLSKWSKLLAKNQAIKKTTGFKPGSEVQKEMAGQRVCQIMGTESWNSNVNIPEDILALSNEGSYDFRKSEAPQTVKLLTASSDDYTKKSVLGLSLSQTRERRKVQLVEQPGQKTVSRSPQAARVGPVSKGRPMSADDIQKAKMRALFMQSKYGKPGSSKGSKEAKTDGLNKPQTNQVGLGASLSKIPVSTKTDEDSKPFLLPSKTPNTKDASSESYSRLDLKEPFWEKCNQVQIPWKIPAEVKLHDTWRVGTGENSKEVDVQKSRNRRGEEIIFRTIQEIPLNPNEPWDLEMDYDDTLTPPIPIEQLPDVDGTETLAAANEGIQGATPSSSNANANVAEPDLELLAVLLKNPELVFALTSGQAGSIPSEETVKLLDMIKKGSVHLADNTNGSIGGKAQEKVEVSLPSPTPSNDPRTSGWTTEGSKNPFSRHNSMADRSINLPAAAAHMVLPQVPAAPGIAVRQHQTDSLSQAPDVVSALSSVLPTLLTNSSPTTQMLSSNMGLSTMMNDIIPATNASCVNSPFAMRVDSTSISSNVKPIANLRIQEGLSNSHLQSYELPSPTPAPAPAPTLSSSVTPPQRRALLLQRPHFYDPSSHNSLHSYPPPPMEKQGHVSESWRVRQDISSSYHSQVNQNTYSASVERSERSDSSWERNDYGGGGGGFESWSPDNSPSRNNGFIRGRNFPDSRLNPERNYRPEWSRHRGSAGYWDPSRQGSRKWHDQRR 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02604 1021 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Accr5g02604 1021 MobiDBLite consensus disorder prediction 686 725 - -
Accr5g02604 1021 MobiDBLite consensus disorder prediction 891 1021 - -
Accr5g02604 1021 MobiDBLite consensus disorder prediction 851 875 - -
Accr5g02604 1021 MobiDBLite consensus disorder prediction 449 515 - -
Accr5g02604 1021 MobiDBLite consensus disorder prediction 465 487 - -
Accr5g02604 1021 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 230 316 IPR035441 -
Accr5g02604 1021 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 234 318 IPR035441 -
Accr5g02604 1021 MobiDBLite consensus disorder prediction 702 725 - -
Accr5g02604 1021 MobiDBLite consensus disorder prediction 400 432 - -
Accr5g02604 1021 SMART HOX_1 69 131 IPR001356 GO:0003677
Accr5g02604 1021 MobiDBLite consensus disorder prediction 963 977 - -
Accr5g02604 1021 MobiDBLite consensus disorder prediction 983 997 - -
Accr5g02604 1021 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 107 1000 - -
Accr5g02604 1021 MobiDBLite consensus disorder prediction 915 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02604 Accr-Chr5 52317063 52326404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02604 467 733 Homeobox Transcription Factor Family AT4G02560 44.569 6.98e-52 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02604 - - adu:107492506 1124