Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02601 ATGGTTAATCGAACTCTTTCTTGCGCATTTCCTTCCAGAAAACCAAAGCAGAATTTTGGGGTTTCAAATGCACGGTTCTTGTTCTTTTTTCTGAACCGATGGCCTCCTGGACCAGGCTCCTTCAAAATTGAAGCAAATAATTCGAATTTCACTATCGCTTACCTCATAGATTCTTGTGGATTGGCTCCAGAAGCTGCTGCTTCAGTTTCGCAGAAGATACAGATACATTCAAGAGAGAGACCGGATTCTGTCCTAACACTGCTCAGAGAACACGGCCTCTCAGAACCCCAGATTTCAAATGTCGTAAGGAAGCGTCCATCGCTCCTTTTAGCTAATCCCAATGATATCCTTTTGCCAAAGCTTGAATTCTTTTACTCCATAGGGATTTCCAGGTCTGACCTCGCAAGAATCCTCGCTACAGACCCAACCGTTCTGAAAAGAAGCTTGGAGAAACAGATAATTCCCTCTTATAATTTCCTCAAAAGTGTGTTGCTTTCTGATGGGAAGGTCGCTTCTGCGTTGAAGCGCACGTCGTGGATTTTTCTGCAAGACCATACGAAGAAGCTCGTACCAAATATCTCCTTTCTGAGAGCAACGGGTGTGCCAGAATCATGCATTGCATTGTTGCTCGCTCATTTTCCCGAGGCATTAATTCAAAAGAACGATCAATTCGTAGAGATTGTCAAAGAGGTCAGGGAAATGGGATTCGATCCAACCAAGTCGACATTTGTGTTAGCGATCCACGTAATGGCAGGTAATAGATCGATATATAATCGCTGCTACGAGGTGTACCAGAGGTGGGGGTGGTCGGAGGAAGAGATTCAAATGTCATTCAGAAAGCATCCGAATTGCATGCTTCTATCGGAGGACAAAATAACGAAAGCAATGGACTTTCTGGTAAACAAGATGGGTAGGCCTTCGGGGACGATAGCGAGATGCCCAGTGGTATTGTTCTTCAGCTTGGAAAAGAGAATCAAGCCGAGGTGTTCTGTTGTTCAGGCTCTGCGATTGAAGGGCTTGATCAAGAAGACTCTGAGCTTGTCTACTGTGTTGTTGCCGGATAAGAAGCGTTTCGAGGAGAAGTTCGTGACTAAGTATGAGCATCAGGTGCCTGAATTGTGGAGCGTCTATGAGATGAAAGTGGATTTTAGGAGCGTCATTTGA 1164 0.4485 MVNRTLSCAFPSRKPKQNFGVSNARFLFFFLNRWPPGPGSFKIEANNSNFTIAYLIDSCGLAPEAAASVSQKIQIHSRERPDSVLTLLREHGLSEPQISNVVRKRPSLLLANPNDILLPKLEFFYSIGISRSDLARILATDPTVLKRSLEKQIIPSYNFLKSVLLSDGKVASALKRTSWIFLQDHTKKLVPNISFLRATGVPESCIALLLAHFPEALIQKNDQFVEIVKEVREMGFDPTKSTFVLAIHVMAGNRSIYNRCYEVYQRWGWSEEEIQMSFRKHPNCMLLSEDKITKAMDFLVNKMGRPSGTIARCPVVLFFSLEKRIKPRCSVVQALRLKGLIKKTLSLSTVLLPDKKRFEEKFVTKYEHQVPELWSVYEMKVDFRSVI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02601 387 Gene3D Transcription termination factor 3, mitochondrial 144 377 IPR038538 -
Accr5g02601 387 PANTHER CGI-12 PROTEIN-RELATED 48 366 IPR003690 GO:0003690|GO:0006355
Accr5g02601 387 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Accr5g02601 387 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Accr5g02601 387 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Accr5g02601 387 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Accr5g02601 387 SMART mt_12 207 237 IPR003690 GO:0003690|GO:0006355
Accr5g02601 387 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Accr5g02601 387 FunFam Mitochondrial transcription termination factor-like 149 370 - -
Accr5g02601 387 Pfam mTERF 85 238 IPR003690 GO:0003690|GO:0006355
Accr5g02601 387 Pfam mTERF 254 359 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02601 Accr-Chr5 52294593 52295756 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr5g02601 mTERF 2.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02601 K15031 - qsu:112019279 478.404