Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02600 ATGGAAGCATTACATTTCCGGAATCCCAGGATGGTTAATCGAACTCTTTCTTGCGCATTTCCTTCCAGAAAACCAAAGCAGAATTTTGGGGTTTCAAATGCACGGTTCTTGTTCTTTTTTCTGAACCGATGGCCTCCTGGACCAGGCTCCTTCAAAATTGAAGCAAATAATTCGAATTTCACTATCGCTTACCTCATAGATTCTTGTGGATTGGCTCCAGAAGCTGCTGCTTCAGTTTCGCAGAAGATACAGATACATTCAAGAGAGAGACCGGATTCTGTCCTAACACTGCTCAGAGAACACGGCCTCTCAGAACCCCAGATTTCAAATGTCGTAAGGAAGCGTCCATCGCTCCTTTTAGCTAATCCCAATGATATCCTTTTGCCAAAGCTTGAATTCTTTTACTCCATAGGGATTTCCAGGTCTGACCTCGCAAGAATCCTCGCTACAGACCCAACCGTTCTGAAAAGAAGCTTGGAGAAACAGATAATTCCCTCTTATAATTTCCTCAAAAGTGTGTTGCTTTCTGATGGGAAGGTCGCTTCTGCGTTGAAGCGCACGTCGTGGATTTTTCTGCAAGACCATACGAAGAAGCTCGTACCAAATATCTCCTTTCTGAGAGCAACGGGTGTGCCAGAATCATGCATTGCATTGTTGCTCGCTCATTTTCCCGAGGCATTAATTCAAAAGAACGATCAATTCGTAGAGATTGTCAAAGAGGTCAGGGAAATGGGATTCGATCCAACCAAGTCGACATTTGTGTTAGCGATCCACGTAATGGCAGGTAATAGATCGATATATAATCGCTGCTACGAGGTGTACCAGAGGTGGGGGTGGTCGGAGGAAGAGATTCAAATGTCATTCAGAAAGCATCCGAATTGCATGCTTCTATCGGAGGACAAAATAACGAAAGCAATGGACTTTCTGGTAAACAAGATGGGTAGGCCTTCGGGGACGATAGCGAGATGCCCAGTGGTATTGTTCTTCAGCTTGGAAAAGAGAATCAAGCCGAGGTGTTCTGTTGTTCAGGCTCTGCGATTGAAGGGCTTGATCAAGAAGACTCTGAGCTTGTCTACTGTGTTGTTGCCGGATAAGAAGCGTTTCGAGGAGAAGTTCGTGACTAAGTATGAGCATCAGGTGCCTGAATTGTGGAGCGTCTATGAGATGAAAGTGGATTTTAGGAGCGTCATTTGA 1194 0.4489 MEALHFRNPRMVNRTLSCAFPSRKPKQNFGVSNARFLFFFLNRWPPGPGSFKIEANNSNFTIAYLIDSCGLAPEAAASVSQKIQIHSRERPDSVLTLLREHGLSEPQISNVVRKRPSLLLANPNDILLPKLEFFYSIGISRSDLARILATDPTVLKRSLEKQIIPSYNFLKSVLLSDGKVASALKRTSWIFLQDHTKKLVPNISFLRATGVPESCIALLLAHFPEALIQKNDQFVEIVKEVREMGFDPTKSTFVLAIHVMAGNRSIYNRCYEVYQRWGWSEEEIQMSFRKHPNCMLLSEDKITKAMDFLVNKMGRPSGTIARCPVVLFFSLEKRIKPRCSVVQALRLKGLIKKTLSLSTVLLPDKKRFEEKFVTKYEHQVPELWSVYEMKVDFRSVI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02600 397 SMART mt_12 181 212 IPR003690 GO:0003690|GO:0006355
Accr5g02600 397 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Accr5g02600 397 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Accr5g02600 397 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Accr5g02600 397 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Accr5g02600 397 SMART mt_12 109 140 IPR003690 GO:0003690|GO:0006355
Accr5g02600 397 Gene3D Transcription termination factor 3, mitochondrial 154 387 IPR038538 -
Accr5g02600 397 Pfam mTERF 264 369 IPR003690 GO:0003690|GO:0006355
Accr5g02600 397 Pfam mTERF 95 248 IPR003690 GO:0003690|GO:0006355
Accr5g02600 397 FunFam Mitochondrial transcription termination factor-like 159 380 - -
Accr5g02600 397 PANTHER CGI-12 PROTEIN-RELATED 58 376 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02600 Accr-Chr5 52294563 52295756 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr5g02600 mTERF 2.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02600 K15031 - qsu:112019279 478.404